Search results for "Bio::SearchIO::megablast"
Bio::SearchIO::megablast - a driver module for Bio::SearchIO to parse megablast reports (format 0)
Beware! Because of the way megablast report format 0 is coded, realize that score means # gap characters + # mismatches for a HSP. The docs from NCBI regarding FORMAT 0 # 0: Produce one-line output for each alignment, in the form # # 'subject-id'=='[...
CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC - Search in distribution- Bio::SearchIO - Driver for parsing Sequence Database Searches (BLAST, FASTA, ...)
- Bio::SearchIO::gmap_f9 - Event generator for parsing gmap reports (Z format)
FAST::Bio::SearchIO::megablast - a driver module for FAST::Bio::SearchIO to parse megablast reports (format 0)
Beware! Because of the way megablast report format 0 is coded, realize that score means # gap characters + # mismatches for a HSP. The docs from NCBI regarding FORMAT 0 # 0: Produce one-line output for each alignment, in the form # # 'subject-id'=='[...
DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC - Search in distribution- FAST::Bio::SearchIO - Driver for parsing Sequence Database Searches (BLAST, FASTA, ...)
- FAST::Bio::SearchIO::gmap_f9 - Event generator for parsing gmap reports (Z format)