Search results for "Bio::Tools::Genscan"
Bio::Tools::Genscan - Results of one Genscan run
The Genscan module provides a parser for Genscan gene structure prediction output. It parses one gene prediction into a Bio::SeqFeature::Gene::Transcript- derived object. This module also implements the Bio::SeqAnalysisParserI interface, and thus can...
CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC - Search in distribution- Bio::SeqFeatureI - Abstract interface of a Sequence Feature
- Bio::Tools::MZEF - Results of one MZEF run
- Bio::Tools::Grail - Results of one Grail run
- 8 more results from BioPerl »
Bio::Tools::Run::Genscan - Object for identifying genes in a given sequence given a matrix(for appropriate organisms).
Genscan is a gene identifying program developed by Christopher Burge http://genes.mit.edu/burgelab/ By default it looks for an executable called *genscan* and data/parameter files in the directory specified by the *GENSCANDIR* environmental variable....
CJFIELDS/BioPerl-Run-1.007003 - 08 Feb 2019 19:55:33 UTC - Search in distribution
FAST::Bio::SeqFeatureI - Abstract interface of a Sequence Feature
This interface is the functions one can expect for any Sequence Feature, whatever its implementation or whether it is a more complex type (eg, a Gene). This object does not actually provide any implementation, it just provides the definitions of what...
DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC - Search in distribution- FAST::Bio::SeqFeature::Generic - Generic SeqFeature
- FAST::Bio::Tools::GuessSeqFormat - Module for determining the sequence format of the contents of a file, a string, or through a filehandle.