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Search results for "Bio::Tools::OddCodes"

Bio::Tools::OddCodes - Object holding alternative alphabet coding for one protein sequence River stage two • 60 direct dependents • 65 total dependents

Bio::Tools::Oddcodes is a welterweight object for rewriting a protein sequence in an alternative alphabet. Eight of these are provided, ranging from the the 2-letter hydrophobic alphabet, to the 8-letter chemical alphabet. These are useful for the st...

CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC - Search in distribution
  • Bio::Seq::MetaI - Interface for sequence objects with residue-based meta information
  • Bio::Seq::Meta - Generic superclass for sequence objects with residue-based meta information

FAST::Bio::Seq::MetaI - Interface for sequence objects with residue-based meta information River stage zero No dependents

This class defines an abstract interface for basic residue-based meta information. Examples of this kind of meta data are secondary structures (RNA and protein), protein hydrophobicity assignments, or other alternative alphabets for polypeptides, seq...

DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC - Search in distribution
  • FAST::Bio::Seq::Meta - Generic superclass for sequence objects with residue-based meta information
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