Search results for "Bio::Tools::Prediction::Gene"

Bio::Tools::Prediction::Gene - a predicted gene structure feature River stage two • 60 direct dependents • 65 total dependents

A feature representing a predicted gene structure. This class actually inherits off Bio::SeqFeature::Gene::Transcript and therefore has all that functionality, plus a few methods supporting predicted sequence features, like a predicted CDS and a pred...

CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC - Search in distribution

Manual River stage zero No dependents

LMEUNIER/Bio-Palantir-0.211420 - 22 May 2021 20:37:07 UTC - Search in distribution

Bio::KBase::CDMI::Client River stage zero No dependents

RDO/Bio-KBase-0.06 - 15 Aug 2012 23:56:34 UTC - Search in distribution

Bio::Tools::Run::Genewise - Object for predicting genes in a given sequence given a protein River stage one • 2 direct dependents • 2 total dependents

Genewise is a gene prediction program developed by Ewan Birney http://www.sanger.ac.uk/software/wise2. Available Params: NB: These should be passed without the '-' or they will be ignored, except switches such as 'hmmer' (which have no corresponding ...

CJFIELDS/BioPerl-Run-1.007003 - 08 Feb 2019 19:55:33 UTC - Search in distribution
  • Bio::Tools::Run::Genscan - Object for identifying genes in a given sequence given a matrix(for appropriate organisms).

Bio::ToolBox::GeneTools - SeqFeature agnostic methods for working with gene models River stage zero No dependents

This module provides numerous exportable functions for working with gene SeqFeature models. This assumes that the gene models follow the BioPerl Bio::SeqFeatureI convention with nested SeqFeature objects representing the gene, transcript, and exons. ...

TJPARNELL/Bio-ToolBox-1.691 - 13 Oct 2022 18:07:52 UTC - Search in distribution

FAST::Bio::Tools::Genewise - Results of one Genewise run River stage zero No dependents

This is the parser for the output of Genewise. It takes either a file handle or a file name and returns a FAST::Bio::SeqFeature::Gene::GeneStructure object....

DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC - Search in distribution

AI::TensorFlow::Libtensorflow::Manual::Notebook::InferenceUsingTFHubEnformerGeneExprPredModel - Using TensorFlow to do gene expression prediction using a pre-trained model River stage zero No dependents

ZMUGHAL/AI-TensorFlow-Libtensorflow-0.0.7 - 05 Oct 2023 05:37:08 UTC - Search in distribution
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