Search results for "Bio::Tools::Profile"
Bio::Tools::Profile - parse Profile output
Parser for Profile output...
CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC - Search in distribution
Bio::Tools::Run::Profile
Wrapper module for the pfscan program...
CJFIELDS/BioPerl-Run-1.007003 - 08 Feb 2019 19:55:33 UTC - Search in distribution- Bio::Tools::Run::Match - Wrapper for Transfac's match(TM)
- Bio::Tools::Run::Genewise - Object for predicting genes in a given sequence given a protein
- Bio::Tools::Run::Alignment::Muscle - Object for the calculation of an iterative multiple sequence alignment from a set of unaligned sequences or alignments using the MUSCLE program
HackaMol - HackaMol: Object-Oriented Library for Molecular Hacking
The HackaMol publication <http://pubs.acs.org/doi/abs/10.1021/ci500359e> has a more complete description of the library (pdf available from researchgate <http://www.researchgate.net/profile/Demian_Riccardi/publication/2737781 91_HackaMol_an_object-or...
DEMIAN/HackaMol-0.053 - 23 Feb 2022 00:55:44 UTC - Search in distribution
Bio::Tools::Run::Alignment::TCoffee - Object for the calculation of a multiple sequence alignment from a set of unaligned sequences or alignments using the TCoffee program
Note: this DESCRIPTION only documents the (Bio)perl interface to TCoffee. Helping the module find your executable You will need to enable TCoffee to find the t_coffee program. This can be done in (at least) three ways: 1. Make sure the t_coffee execu...
CDRAUG/Bio-Tools-Run-Alignment-TCoffee-1.7.4 - 09 Jul 2018 18:31:30 UTC - Search in distribution
Alien::SeqAlignment::hmmer3 - find, build and install the hmmer3 tools
This distribution provides HMMER3 so that it can be used by other Perl distributions that are on CPAN. The source code will be downloaded from the HMMER3 website, if the HMMER3 is not found in the system path. The url used is : http://eddylab.org/sof...
CHRISARG/Alien-SeqAlignment-hmmer3-0.03 - 24 Mar 2024 03:13:58 UTC - Search in distribution
Alien::SeqAlignment::MMseqs2 - find, build and install the mmseqs2 tools
This distribution provides MMseqs2 so that it can be used by other Perl distributions that are on CPAN. The source code will be downloaded from the MMseqs2 website, if it is not found in the system path. The program will then be built and installed i...
CHRISARG/Alien-SeqAlignment-MMseqs2-0.02 - 24 Mar 2024 03:44:49 UTC - Search in distribution