#NEXUS
[This file is based on PF00034_39.nex downloaded from molevol.org/nexplorer]
BEGIN TAXA;
TITLE PF00034_39;
DIMENSIONS ntax=6;
TAXLABELS Chaetoceros_gracilis_BAC54099.1 Chlorella_vulgaris_BAC76447.1 Chlorella_vulgaris_BAC76448.1 Chlamydomonas_reinhardtii_AAB00729.1 Phaeodactylum_tricornutum_AAO43197.1 Arabidopsis_thaliana_BAB10887.1;
END;
BEGIN CHARACTERS;
TITLE protein;
LINK taxa=PF00034_39;
DIMENSIONS ntax=6 nchar=157;
FORMAT datatype=protein gap=- missing=?;
MATRIX
Chlorella_vulgaris_BAC76448.1 ---------MAALTICSAAAGKAQAVRSS-AQKPKAVAALPRLATAVG-AAAVLLT--STPAFAGDLTLGQQVFDNNCPRATWAARTACSPEKTLQKAALEQYLEGGFSVASIITQVENGKGAMPAWSGRLDSDEIESVAEYVFKQAEGNLW-----
Chlorella_vulgaris_BAC76447.1 ---------MQRTAVLCSTPNAARAVAQVRTPAPAKLLALKRAATGLG-AAAVVLSTAAAPVLAADLVLGAEVFNNNCAACHAGGQNSVINERTLQKGALEQYLAGGFNVEAITTQVTNGKGAMPAWGDRLDEDEIAAVAAYVFDQASGNKW-----
Phaeodactylum_tricornutum_AAO43197.1 -------MKLAVIATLLATA-SAFSIQAEFSKVAKGAAAVGVGAVIAA-----------APALAGDVGAGEQIFNANCAACHAGGQNVIMPEKTLEKEALDQYLAGGRTEKSIISQVTGGKNAMPAFGGRLSDEEIANVAAYVLASAEAG-WE----
Chlamydomonas_reinhardtii_AAB00729.1 ------MLQLANRSVRAKAARASQSARSVSCAAAKRGADVAPLTSALAVTASILLTTGAASASAADLALGAQVFNGNCAACHMGGRNSVMPEKTLDKAALEQYLDGGFKVESIIYQVENGKGAMPAWADRLSEEEIQAVAEYVFKQATDAAWKY---
Arabidopsis_thaliana_BAB10887.1 MESGFCNWKQRCNQCIVELLLELKYVLNVFMKVSCFYGYCGVESLGQTLDIQRG-ATLFNRACIGCHDTGGNIIQPGATLFTKDLERNG--VDTEEEIYRVTYFGKGRMPG---FGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADQGWPTVSTD
Chaetoceros_gracilis_BAC54099.1 -------MKLALIATLATSA-AAFSISPQ--KAAQAGAVAAAIATSVA-----------APAFAGDVAAGEQVFNANCAACHAGGQNVIMPEKTLEKDALEQYLAGGRNEKAVITQVTNGKNAMPAFGGRLSDDDIANVASYVIATSESG-WDE---
;
END;
BEGIN ASSUMPTIONS;
TITLE proteinweight;
LINK taxa=PF00034_39;
LINK characters=protein;
WTSET CORE_column_scores (VECTOR TOKENS) =
- - 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 3 0 0 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 0 1 1 1 1 1 2 1 1 1 1 3 3 3 3 3 3 4 4 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2 3 3 3 3 3 3 3 3 3 3 4 4 3 4 3 3 3 3 3 5 5 5 3 4 4 4 4 4 4 4 4 4 3 4 4 4 4 4 4 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2 2 0 1 0 1 0 0 - - -;
END;