LOCUS BC000007 981 bp mRNA linear PRI 09-DEC-2005
DEFINITION Homo sapiens px19-like protein, mRNA (cDNA clone MGC:1082
IMAGE:3505068), complete cds.
ACCESSION BC000007
VERSION BC000007.2 GI:33875090
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 981)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 981)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced gi:12652536.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: f Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543450.
Differences found between this sequence and the human reference
genome (build 36) are described in misc_difference features below
and these differences were also compared to chimpanzee genomic
sequences available as of 09/15/2004.
FEATURES Location/Qualifiers
source 1..981
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1082 IMAGE:3505068"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..981
/gene="PX19"
/note="synonyms: CGI-106, PRELI"
/db_xref="GeneID:27166"
/db_xref="MIM:605733"
CDS 174..833
/gene="PX19"
/codon_start=1
/product="PX19 protein"
/protein_id="AAH00007.1"
/db_xref="GI:12652537"
/db_xref="GeneID:27166"
/db_xref="MIM:605733"
/translation="MVKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREV
TPDQKLLSRRLLTKTNRMPRWAERLFPANVAHSVYVLEDSIVDPQNQTMTTFTWNINH
ARLMVVEERCVYCVNSDNSGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMK
GFEYILAKLQGEAPSKTLVETAKEAKEKAKETALAATEKAKDLASKAATKKQQQQQQF
V"
misc_difference 623
/gene="PX19"
/note="'G' in cDNA is 'A' in the human genome; no amino
acid change. The chimpanzee genome agrees with the cDNA
sequence, suggesting that this difference is unlikely to
be due to an artifact."
misc_difference 878
/gene="PX19"
/note="'C' in cDNA is 'T' in the human genome. The
chimpanzee genome agrees with the cDNA sequence,
suggesting that this difference is unlikely to be due to
an artifact."
misc_difference 925..981
/gene="PX19"
/note="polyA tail: 57 bases do not align to the human
genome."
ORIGIN
1 ctcatggcgg cggcggcggc ggcggcagct gcttgggcgc ggtgcggtgg tgactgagct
61 acgagcctgg cggcgggtgt gcgccgagcc ccggcccggc ccggccctcg cgtgcctccc
121 aggctccgca cccctgatgc tgcgcgggtg ctgagcccgc ttcggccggg acgatggtga
181 agtatttcct gggccagagc gtgctccgga gttcctggga ccaagtgttc gccgccttct
241 ggcagcggta cccgaatccc tatagcaaac atgtcttgac ggaagacata gtacaccggg
301 aggtgacccc tgaccagaaa ctgctgtccc ggcgactcct gaccaagacc aacaggatgc
361 cacgctgggc cgagcgacta tttcctgcca atgttgctca ctcggtgtac gtcctggagg
421 actctattgt ggacccacag aatcagacca tgactacctt cacctggaac atcaaccacg
481 cccggctgat ggtggtggag gaacgatgtg tttactgtgt gaactctgac aacagtggct
541 ggactgaaat ccgccgggaa gcctgggtct cctctagctt atttggtgtc tccagagctg
601 tccaggaatt tggtcttgcc cggttcaaaa gcaacgtgac caagactatg aagggttttg
661 aatatatctt ggctaagctg caaggcgagg ccccttccaa aacacttgtt gagacagcca
721 aggaagccaa ggagaaggca aaggagacgg cactggcagc tacagagaag gccaaggacc
781 tcgccagcaa ggcggccacc aagaagcagc agcagcagca acagtttgtg tagccagtct
841 accaccacca cagcacccca gacagctagg cttagcccct ctgccctccc ttcattgtac
901 tttatcatta aaaatcaact tccaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
961 aaaaaaaaaa aaaaaaaaat a
//