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CJFIELDS / BioPerl-1.007000 / t / data / bl2seq+.blastn 
BLASTN 2.2.29+


Query= gi|2695846|emb|Y13255.1| Acipenser baeri mRNA for immunoglobulin
heavy chain, clone ScH 3.3

Length=606

Subject= gi|2695846|emb|Y13255.1| Acipenser baeri mRNA for immunoglobulin
heavy chain, clone ScH 3.3

Length=606


 Score =  1120 bits (606),  Expect = 0.0
 Identities = 606/606 (100%), Gaps = 0/606 (0%)
 Strand=Plus/Plus

Query  1    TGGTTACAACACTTTCTTCTTTCAATAACCACAATACTGCAGTACAATGGGGATTTTAAC  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    TGGTTACAACACTTTCTTCTTTCAATAACCACAATACTGCAGTACAATGGGGATTTTAAC  60

Query  61   AGCTCTCTGTATAATAATGACAGCTCTATCAAGTGTCCGGTCTGATGTAGTGTTGACTGA  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61   AGCTCTCTGTATAATAATGACAGCTCTATCAAGTGTCCGGTCTGATGTAGTGTTGACTGA  120

Query  121  GTCCGGACCAGCAGTTATAAAGCCTGGAGAGTCCCATAAACTGTCCTGTAAAGCCTCTGG  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121  GTCCGGACCAGCAGTTATAAAGCCTGGAGAGTCCCATAAACTGTCCTGTAAAGCCTCTGG  180

Query  181  ATTCACATTCAGCAGCGCCTACATGAGCTGGGTTCGACAAGCTCCTGGAAAGGGTCTGGA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  ATTCACATTCAGCAGCGCCTACATGAGCTGGGTTCGACAAGCTCCTGGAAAGGGTCTGGA  240

Query  241  ATGGGTGGCTTATATTTACTCAGGTGGTAGTAGTACATACTATGCCCAGTCTGTCCAGGG  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241  ATGGGTGGCTTATATTTACTCAGGTGGTAGTAGTACATACTATGCCCAGTCTGTCCAGGG  300

Query  301  AAGATTCGCCATCTCCAGAGACGATTCCAACAGCATGCTGTATTTACAAATGAACAGCCT  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301  AAGATTCGCCATCTCCAGAGACGATTCCAACAGCATGCTGTATTTACAAATGAACAGCCT  360

Query  361  GAAGACTGAAGACACTGCCGTGTATTACTGTGCTCGGGGCGGGCTGGGGTGGTCCCTTGA  420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  361  GAAGACTGAAGACACTGCCGTGTATTACTGTGCTCGGGGCGGGCTGGGGTGGTCCCTTGA  420

Query  421  CTACTGGGGGAAAGGCACAATGATCACCGTAACTTCTGCTACGCCATCACCACCGACAGT  480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  421  CTACTGGGGGAAAGGCACAATGATCACCGTAACTTCTGCTACGCCATCACCACCGACAGT  480

Query  481  GTTTCCGCTTATGGAGTCATGTTGTTTGAGCGATATCTCGGGTCCTGTTGCTACGGGCTG  540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  481  GTTTCCGCTTATGGAGTCATGTTGTTTGAGCGATATCTCGGGTCCTGTTGCTACGGGCTG  540

Query  541  CTTAGCAACCGGATTCTGCCTACCCCCGCGACCTTCTCGTGGACTGATCAATCTGGAAAA  600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  541  CTTAGCAACCGGATTCTGCCTACCCCCGCGACCTTCTCGTGGACTGATCAATCTGGAAAA  600

Query  601  GCTTTT  606
            ||||||
Sbjct  601  GCTTTT  606



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 352836




Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5