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CJFIELDS / BioPerl-1.007000 / t / data / mutations.old.dat 
ID           M20132:(362)c.+4G>A; E2K
Feature      DNA; 1
Feature        /label: point, transition
Feature        /proof: computed
Feature        /location: 4
Feature        /upflank: gaagattcagccaagctcaaggatg
Feature        /change: g>a
Feature        /dnflank: aagtgcagttagggctgggaagggt
Feature        /re_site: -BccI
Feature      RNA; 1
Feature        /label: missense
Feature        /proof: experimental
Feature        /location: 4 (M20132::366)
Feature        /upflank: gaagattcagccaagctcaaggatg
Feature        /change: g>a
Feature        /dnflank: aagtgcagttagggctgggaagggt
Feature        /re_site: -BccI
Feature        /codon_table: 1
Feature        /codon: gaa>aaa; 1
Feature        /region: coding
Feature      AA; 1
Feature        /label: substitution, conservative
Feature        /proof: computed
Feature        /location: 2
Feature        /change: E>K
//
ID           M20132:(362)c.+14T>A; L5X
Feature      DNA; 1
Feature        /label: point, transversion
Feature        /proof: computed
Feature        /location: 14
Feature        /upflank: ccaagctcaaggatggaagtgcagt
Feature        /change: t>a
Feature        /dnflank: agggctgggaagggtctaccctcgg
Feature      RNA; 1
Feature        /label: nonsense
Feature        /proof: experimental
Feature        /location: 14 (M20132::376)
Feature        /upflank: ccaagctcaaggatggaagtgcagt
Feature        /change: t>a
Feature        /dnflank: agggctgggaagggtctaccctcgg
Feature        /codon_table: 1
Feature        /codon: tta>taa; 2
Feature        /region: coding
Feature      AA; 1
Feature        /label: truncation
Feature        /proof: computed
Feature        /location: 5
Feature        /change: L>*
//
ID           M20132:(362)c.+4G>A; E2K
Feature      DNA; 1
Feature        /label: point, transition
Feature        /proof: computed
Feature        /location: 4
Feature        /upflank: gaagattcagccaagctcaaggatg
Feature        /change: g>a
Feature        /dnflank: aagtgcagttagggctgggaagggt
Feature        /re_site: -BccI
Feature      RNA; 1
Feature        /label: missense
Feature        /proof: experimental
Feature        /location: 4 (M20132::366)
Feature        /upflank: gaagattcagccaagctcaaggatg
Feature        /change: g>a
Feature        /dnflank: aagtgcagttagggctgggaagggt
Feature        /re_site: -BccI
Feature        /codon_table: 1
Feature        /codon: gaa>aaa; 1
Feature        /region: coding
Feature      AA; 1
Feature        /label: substitution, conservative
Feature        /proof: computed
Feature        /location: 2
Feature        /change: E>K
//
ID           M20132:(362)c.+100delATCCAG; I34del-2
Feature      DNA; 1
Feature        /label: deletion
Feature        /proof: computed
Feature        /location: 100..105
Feature        /upflank: tctgttccagagcgtgcgcgaagtg
Feature        /change: atccag>
Feature        /dnflank: aacccgggccccaggcacccagagg
Feature        /re_site: -BinI, -BsiYI, -DpnI, -Hpy178III, -MboI, +MjaIV
Feature      RNA; 1
Feature        /label: inframe, deletion
Feature        /proof: experimental
Feature        /location: 100..105 (M20132::462..467)
Feature        /upflank: tctgttccagagcgtgcgcgaagtg
Feature        /change: atccag>
Feature        /dnflank: aacccgggccccaggcacccagagg
Feature        /re_site: -BinI, -BsiYI, -DpnI, -Hpy178III, -MboI, +MjaIV
Feature        /codon_table: 1
Feature        /codon: atc>-; 1
Feature        /region: coding
Feature      AA; 1
Feature        /label: deletion
Feature        /proof: computed
Feature        /location: 34..35
Feature        /change: IQ>
//
ID           M20132:(362)c.+101delT; I34delX172
Feature      DNA; 1
Feature        /label: deletion
Feature        /proof: computed
Feature        /location: 101
Feature        /upflank: ctgttccagagcgtgcgcgaagtga
Feature        /change: t>
Feature        /dnflank: ccagaacccgggccccaggcaccca
Feature        /re_site: -BinI, -DpnI, -Hpy178III, +MaeIII, -MboI, +Tsp45I
Feature      RNA; 1
Feature        /label: frameshift, deletion
Feature        /proof: experimental
Feature        /location: 101 (M20132::463)
Feature        /upflank: ctgttccagagcgtgcgcgaagtga
Feature        /change: t>
Feature        /dnflank: ccagaacccgggccccaggcaccca
Feature        /re_site: -BinI, -DpnI, -Hpy178III, +MaeIII, -MboI, +Tsp45I
Feature        /codon_table: 1
Feature        /codon: atc>-; 2
Feature        /region: coding
Feature      AA; 1
Feature        /label: out-of-frame translation, truncation
Feature        /proof: computed
Feature        /location: 34
Feature        /change: I>TRTRAPGTQRPRAQHLPAPVCCCCSSSSSSSSSSSSSSSSSSSSKRLAP
Feature         GSSSSSRVRMVLPKPIVEAPQATWSWMRNSNLHSRSRPWSATPREVASQSLEPPWPPAR
Feature         GCRSSCQHLRTRMTQLPHPRCPCWAPLSPA*
//
ID           M20132:(362)c.+101insGGGCCC; I34ins+2
Feature      DNA; 1
Feature        /label: insertion
Feature        /proof: computed
Feature        /location: 100^101
Feature        /upflank: ctgttccagagcgtgcgcgaagtga
Feature        /change: >gggccc
Feature        /dnflank: tccagaacccgggccccaggcaccc
Feature        /re_site: +ApaI, +AsuI, -BinI, +BmgI, +BseSI, +CviJI, -DpnI,
Feature         +DraII, +GsuI, +HaeIII, +HgiJII, -MboI, +MnlI, +NlaIV,
Feature         +SduI
Feature      RNA; 1
Feature        /label: inframe, insertion
Feature        /proof: experimental
Feature        /location: 100^101 (M20132::462^463)
Feature        /upflank: ctgttccagagcgtgcgcgaagtga
Feature        /change: >gggccc
Feature        /dnflank: tccagaacccgggccccaggcaccc
Feature        /re_site: +ApaI, +AsuI, -BinI, +BmgI, +BseSI, +CviJI, -DpnI,
Feature         +DraII, +GsuI, +HaeIII, +HgiJII, -MboI, +MnlI, +NlaIV,
Feature         +SduI
Feature        /codon_table: 1
Feature        /codon: atc>-; 2
Feature        /region: coding
Feature      AA; 1
Feature        /label: insertion, complex
Feature        /proof: computed
Feature        /location: 34
Feature        /change: I>RAL
//
ID           M20132:(362)c.+100insG; I34ins81X
Feature      DNA; 1
Feature        /label: insertion
Feature        /proof: computed
Feature        /location: 99^100
Feature        /upflank: tctgttccagagcgtgcgcgaagtg
Feature        /change: >g
Feature        /dnflank: atccagaacccgggccccaggcacc
Feature        /re_site: +BamHI, +BinI, +NlaIV, +XhoII
Feature      RNA; 1
Feature        /label: frameshift, insertion
Feature        /proof: experimental
Feature        /location: 99^100 (M20132::461^462)
Feature        /upflank: tctgttccagagcgtgcgcgaagtg
Feature        /change: >g
Feature        /dnflank: atccagaacccgggccccaggcacc
Feature        /re_site: +BamHI, +BinI, +NlaIV, +XhoII
Feature        /codon_table: 1
Feature        /codon: atc>-; 1
Feature        /region: coding
Feature      AA; 1
Feature        /label: out-of-frame translation, truncation
Feature        /proof: computed
Feature        /location: 34
Feature        /change: I>DPEPGPQAPRGRERSTSRRQFAAAAAAAAAAAAAAAAAAAAAAAARD*
//
ID           M20132:(362)c.+100AT>GGGCCC; I34ins82X
Feature      DNA; 1
Feature        /label: complex
Feature        /proof: computed
Feature        /location: 100..101
Feature        /upflank: tctgttccagagcgtgcgcgaagtg
Feature        /change: at>gggccc
Feature        /dnflank: ccagaacccgggccccaggcaccca
Feature        /re_site: +ApaI, +AsuI, -BinI, +BmgI, +BseSI, +CviJI, -DpnI,
Feature         +DraII, +HaeIII, +HgiJII, -Hpy178III, -MboI, +NlaIV, +SduI
Feature      RNA; 1
Feature        /label: frameshift, complex
Feature        /proof: experimental
Feature        /location: 100..101 (M20132::462..463)
Feature        /upflank: tctgttccagagcgtgcgcgaagtg
Feature        /change: at>gggccc
Feature        /dnflank: ccagaacccgggccccaggcaccca
Feature        /re_site: +ApaI, +AsuI, -BinI, +BmgI, +BseSI, +CviJI, -DpnI,
Feature         +DraII, +HaeIII, +HgiJII, -Hpy178III, -MboI, +NlaIV, +SduI
Feature        /codon_table: 1
Feature        /codon: atc>-; 1
Feature        /region: coding
Feature      AA; 1
Feature        /label: out-of-frame translation, truncation
Feature        /proof: computed
Feature        /location: 34
Feature        /change: I>GPPEPGPQAPRGRERSTSRRQFAAAAAAAAAAAAAAAAAAAAAAAARD*
//
ID           M20132:(362+1)c.-1G>A
Feature      DNA; 1
Feature        /label: point, transition
Feature        /proof: computed
Feature        /location: -1
Feature        /upflank: ggtggaagattcagccaagctcaag
Feature        /change: g>a
Feature        /dnflank: atggaagtgcagttagggctgggaa
Feature        /re_site: -BccI, -FokI, +Hpy178III
Feature      RNA; 1
Feature        /label: unknown
Feature        /proof: experimental
Feature        /location: -1 (M20132::361)
Feature        /upflank: ggtggaagattcagccaagctcaag
Feature        /change: g>a
Feature        /dnflank: atggaagtgcagttagggctgggaa
Feature        /re_site: -BccI, -FokI, +Hpy178III
Feature        /region: 5'UTR
//
ID           M20132:(362)c.+2766T>C
Feature      DNA; 1
Feature        /label: point, transition
Feature        /proof: computed
Feature        /location: 2766
Feature        /upflank: tctatttccacacccagtgaagcat
Feature        /change: t>c
Feature        /dnflank: ggaaaccctatttccccaccccagc
Feature        /re_site: +Hpy188I, +SfaNI, -XcmI
Feature      RNA; 1
Feature        /label: unknown
Feature        /proof: experimental
Feature        /location: 2766 (M20132::3128)
Feature        /upflank: tctatttccacacccagtgaagcat
Feature        /change: t>c
Feature        /dnflank: ggaaaccctatttccccaccccagc
Feature        /re_site: +Hpy188I, +SfaNI, -XcmI
Feature        /region: 3'UTR
//
ID           J02933:(521)g.+12165A>G
Feature      DNA; 1
Feature        /label: point, transition
Feature        /proof: experimental
Feature        /location: 12165 (J02933::12686)
Feature        /upflank: cgcacacctgtggtgcctgccaccc
Feature        /change: a>g
Feature        /dnflank: ctgggttgcccatgattcatttttg
Feature        /re_site: +AciI, -BfiI, -BsrI, +FauI, +NspBII, +Sth132I,
Feature         -TspRI
Feature        /region: 3'UTR; (+1027)
Feature      RNA; 1
Feature        /label: unknown
Feature        /proof: computed
Feature        /location: 2428
Feature        /upflank: cgcacacctgtggtgcctgccaccc
Feature        /change: a>g
Feature        /dnflank: ctgggttgcccatgattcatttttg
Feature        /re_site: +AciI, -BfiI, -BsrI, +FauI, +NspBII, +Sth132I,
Feature         -TspRI
Feature        /region: 3'UTR; (-1)
//
ID           J02933:(521)g.+4G>T; V2F
Feature      DNA; 1
Feature        /label: point, transversion
Feature        /proof: computed
Feature        /location: 4 (J02933::525)
Feature        /upflank: gcagcactgcagagatttcatcatg
Feature        /change: g>t
Feature        /dnflank: tctcccaggccctcaggctcctctg
Feature        /re_site: -BsmAI, -Eco31I
Feature        /region: exon; 1 (+4)
Feature      RNA; 1
Feature        /label: missense
Feature        /proof: experimental
Feature        /location: 4
Feature        /upflank: gcagcactgcagagatttcatcatg
Feature        /change: g>t
Feature        /dnflank: tctcccaggccctcaggctcctctg
Feature        /re_site: -BsmAI, -Eco31I
Feature        /codon_table: 1
Feature        /codon: gtc>ttc; 1
Feature        /region: coding
Feature      AA; 1
Feature        /label: substitution, nonconservative
Feature        /proof: computed
Feature        /location: 2
Feature        /change: V>F
//
ID           J02933:(521)g.+1168G>T; D34Y
Feature      DNA; 1
Feature        /label: point, transversion
Feature        /proof: computed
Feature        /location: 1168 (J02933::1689)
Feature        /upflank: taaggcctcaggaggagaaacacgg
Feature        /change: g>t
Feature        /dnflank: acatgccgtggaagccggggcctca
Feature        /re_site: -BscGI, -Bsp24I, -CjePI, -FinI, +RsaI, -Sth132I,
Feature         +Tsp4CI
Feature        /region: exon; 1 (-29)
Feature      RNA; 1
Feature        /label: missense
Feature        /proof: experimental
Feature        /location: 100
Feature        /upflank: taaggcctcaggaggagaaacacgg
Feature        /change: g>t
Feature        /dnflank: acatgccgtggaagccggggcctca
Feature        /re_site: -BscGI, -Bsp24I, -CjePI, -FinI, +RsaI, -Sth132I,
Feature         +Tsp4CI
Feature        /codon_table: 1
Feature        /codon: gac>tac; 1
Feature        /region: coding
Feature      AA; 1
Feature        /label: substitution, nonconservative
Feature        /proof: computed
Feature        /location: 34
Feature        /change: D>Y
//
ID           J02933:(521+1)g.-4C>G
Feature      DNA; 1
Feature        /label: point, transversion
Feature        /proof: computed
Feature        /location: -4 (J02933::518)
Feature        /upflank: ggcaggggcagcactgcagagattt
Feature        /change: c>g
Feature        /dnflank: atcatggtctcccaggccctcaggc
Feature        /re_site: +BclI, +DpnI, +MboI
Feature        /region: 5'UTR; (-4)
Feature      RNA; 1
Feature        /label: unknown
Feature        /proof: experimental
Feature        /location: -4
Feature        /upflank: ggcaggggcagcactgcagagattt
Feature        /change: c>g
Feature        /dnflank: atcatggtctcccaggccctcaggc
Feature        /re_site: +BclI, +DpnI, +MboI
Feature        /region: 5'UTR; (+31)
//