LOCUS AY095303S1 2375 bp DNA linear PLN 21-JAN-2003
DEFINITION Chlamydomonas reinhardtii c-type cytochrome synthesis 1 (CCS1)
gene, ccs1-ac206 allele, 5'UTR and exons 1 through 6.
ACCESSION AY095303
VERSION AY095303.1 GI:25986619
KEYWORDS .
SEGMENT 1 of 2
SOURCE Chlamydomonas reinhardtii
ORGANISM Chlamydomonas reinhardtii
Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Volvocales;
Chlamydomonadaceae; Chlamydomonas.
REFERENCE 1 (bases 1 to 2375)
AUTHORS Dreyfuss,B.W., Hamel,P.P., Nakamoto,S.S. and Merchant,S.
TITLE Functional Analysis of a Divergent System II Protein, Ccs1,
Involved in c-Type Cytochrome Biogenesis
JOURNAL J. Biol. Chem. 278 (4), 2604-2613 (2003)
PUBMED 12427747
REFERENCE 2 (bases 1 to 2375)
AUTHORS Dreyfuss,B.W., Hamel,P., Nakamoto,S.S. and Merchant,S.
TITLE Direct Submission
JOURNAL Submitted (11-APR-2002) Department of Chemistry & Biochemistry,
University of California, Los Angeles, P.O. Box 951569, 405 Hilgard
Avenue, Los Angeles, CA 90095-1569, USA
FEATURES Location/Qualifiers
source 1..2375
/organism="Chlamydomonas reinhardtii"
/mol_type="genomic DNA"
/strain="ccs1-ac206"
/db_xref="taxon:3055"
gene order(124..2375,AY095304.1:1..1465)
/gene="CCS1"
/allele="ccs1-ac206"
mRNA join(124..330,512..825,1045..1233,1418..1798,2000..2131,
2253..2345,AY095304.1:6..303,AY095304.1:495..677,
AY095304.1:863..1465)
/gene="CCS1"
/product="c-type cytochrome synthesis 1"
exon 124..330
/gene="CCS1"
/number=1
5'UTR 124..206
/gene="CCS1"
CDS join(207..330,512..825,1045..1233,1418..1798,2000..2131,
2253..2345,AY095304.1:6..303,AY095304.1:495..677,
AY095304.1:863..1098)
/gene="CCS1"
/codon_start=1
/product="c-type cytochrome synthesis 1"
/protein_id="AAM44130.1"
/db_xref="GI:25986621"
/translation="MQPYASVSGRCLSRPDALHVIPFGRPLQAIAGRRFVRCFAKGGQ
PGDKKKLNVTDKLRLGNTPPTLDVLKAPRPTDAPSAIDDAPSTSGLGLGGGVASPRTL
VQSNAVQVAWRRLMKELSSLPRAIAIMALIAVLSGLGTFIPQNKSIEYYLVNYPDGAE
KVLGFLTGDLILTLQLDHIYTADYFYLSMGLLAASLAACTYTRQWPAVKVAQRWRFLT
QPKSLLKQGRTEVLPNARVSDLGAILLQRGYQVRESCACQRTAAALLLRFHSVAADPS
PLLSFVLVAQVFVKDGSLYGFKGLAGKLGPIGVHAALLLCLFGTAWSGFGTLKGNVMC
PEGQDFQVASFLQPSSPIASMPASASNVIHVNKFTIDYRPDGSVAQFYSDLSLLDPAQ
GGKEMMRKTISVNDPFRFNGVTMYQTDWSLSAVTLRVLGQDAPLARAAQAAEAQAAAS
TSGPTSSASSTSDALPQQRTAFNLPMASLEGKPGVAGRLWATFLPLAEPGQDGSAPKG
ISILARDPQSVVFYDAKGQFVGVRRPGSGKPIEVEGLALVVEDVTGATGLELKSDPGV
PAVYAGFGGLMVTTLISYLSHSQVWALQQGSSLFVSGRTNRAKLAFDRELDDILNAVP
ELPPTAATTVASSASTAAPAPTAKQ"
exon 512..825
/gene="CCS1"
/number=2
exon 1045..1233
/gene="CCS1"
/number=3
exon 1418..1798
/gene="CCS1"
/number=4
variation 1648
/gene="CCS1"
/note="results in readthrough of typical intron 4 and
addition of 36 amino acids within stromal loop"
/replace="g"
exon 2000..2131
/gene="CCS1"
/number=5
exon 2253..2345
/gene="CCS1"
/number=6
BASE COUNT 474 a 718 c 697 g 486 t
ORIGIN
1 cacatacgac cccaagcagg gccctgcgtg ggtgaaatgc cacacgcggc acgaatccgt
61 cggccactcc atgaattgcc cacaaggcca caattgagcc tacaaggatg tggaagtgat
121 aactacctag ctccactacc agctgcgact gcccagttct cgagctttct ttctgtccgg
181 ccccgcgctt gcacgcgtgc acaaaaatgc agccatacgc ttccgtgagc gggcgatgtc
241 tatctagacc agatgcattg catgtgatac cgtttgggcg accgctgcaa gcaattgccg
301 ggcggcggtt cgttcgctgt tttgcgaaag gtgcgcagcc ggggaaagaa cacacgaatg
361 ggtgtgcagg caattgatgg tttcactatc aattaattat cagggctggg ttgtacgcac
421 ttggcagtgg acttgcatgc gtggaagcga tgtcgccacg ctgctattca aatattaagt
481 tggagcctgc tctgctggac ccaaaacata ggaggacaac ctggtgacaa gaagaagctc
541 aacgtgacgg acaagctgcg cctcgggaac actcctccca cgctggacgt gcttaaagcg
601 ccacggccaa ccgacgctcc ctcagccatc gatgacgccc ccagcacttc gggcctgggg
661 ctgggcggag gagtggcgag ccccaggact ttggtgcagt ccaatgccgt gcaggtggcg
721 tggcgccggc tcatgaagga gctgtcgtcg ctcccacgcg ccatcgccat catggccctc
781 atcgccgtgc tgtcgggcct gggcaccttc atcccccaaa acaaggtgcg ggggaatgcg
841 acacatgaag ttaatgcaat tctgccaacc aagctgaagc acttgcattg gagccgcgcg
901 ggatgagcca gcacaccagc tttgacctgc gcgtaccgca accaggcacc tacgccctcc
961 cgcgcagtgc ctccctttcg gtctctccga ctcttccaac ctgtctgacc ctcatctcca
1021 ccccccaatg tatccatcca acagtccatc gagtactacc tggtcaacta cccagacggc
1081 gcggagaagg tgctggggtt cctgactggc gacctcattc tgaccctaca gctggaccac
1141 atctacaccg ctgactattt ctacctgtcc atggggctgc tggccgcctc cctggctgcc
1201 tgcacctaca cccgccagtg gcccgccgta aaggtgcgtg cgtaaagggt ttgggagtcg
1261 taggaggaag gcagggtaga tggcgggaag gggcggacag agaggaagga ttggggcgta
1321 ggttgtggtg acggagaagg cccggttgga gcctgcacgg gggttaggta aaggtgaaag
1381 gcaggcaaat accgcccact cgtcgtgttc ctgacaggtg gctcagcgct ggcgcttcct
1441 gacgcagccg aagtcgctgc ttaagcaggg gcgcacggag gtgttgccca acgcgcgtgt
1501 gtccgacctg ggcgctatcc tgctgcagcg gggctaccag gtgagggaga gctgtgcgtg
1561 tcagcgtacg gctgctgcat tacttcttag gtttcactcc gtcgctgctg acccttcacc
1621 tctgctttcc tttgttcttg tggctcaagt gtttgtgaag gacggctcct tatacggctt
1681 caagggcctg gccggcaaac tggggcccat cggcgtgcac gcggcgctgc tgctgtgcct
1741 gttcggtacg gcgtggagcg ggttcggcac cctcaagggc aacgtcatgt gcccggaggt
1801 gagggagcag aggacgcaca tggttgtctg gtggcggcac ggagacacgg tagtgacaag
1861 ccggctcagg gcagtttggg aaggtggtga tgcaagttgc tggccaggga agtacgctca
1921 cccatgttct ccgagtgctt gctatgttcc aacacgatcc cagaaatcgc acgaggacca
1981 atcaacgttg cgcctgcagg gtcaagactt ccaggtggct tccttcctgc agccgtcctc
2041 gccaattgcc agcatgcccg cctccgcctc caacgtcatc cacgtcaaca agttcaccat
2101 tgactaccgc ccagatggct cagtggcgca ggtgcgtgcg ctacaggttg gccggaacca
2161 tgccacactt tgcaccctca ccattcctgc gatagtgttg gttctcatca gtactgacgt
2221 attcatctcc ctccatctgc cctatcccgc agttctactc ggacttgtcg ctgcttgatc
2281 ccgcccaggg cggcaaggaa atgatgcgca agaccatcag cgtgaacgac cccttccgct
2341 tcaacgtgag aatacaacgc atgacggtac ctgct
//