ID AF036895 standard; DNA; INV; 3693 BP.
XX
AC AF036895;
XX
SV AF036895.1
XX
DT 22-DEC-1997 (Rel. 54, Created)
DT 03-MAR-2000 (Rel. 62, Last updated, Version 6)
XX
DE Chironomus thummi special lobe-specific silk protein ssp160 gene, complete
DE cds.
XX
KW .
XX
OS Chironomus thummi
OC Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC Endopterygota; Diptera; Nematocera; Chironomoidea; Chironomidae;
OC Chironominae; Chironomus.
XX
RN [1]
RP 1-3644
RX MEDLINE; 96199249.
RX PUBMED; 8621663.
RA Hoffman R.T., Schmidt E.R., Case S.T.;
RT "A cell-specific glycosylated silk protein from Chironomus thummi salivary
RT glands. Cloning, chromosomal localization, and characterization of cDNA";
RL J. Biol. Chem. 271(16):9809-9815(1996).
XX
RN [2]
RP 1-3693
RX MEDLINE; 99077856.
RX PUBMED; 9858763.
RA Berezikov E., Blinov A.G., Scherbik S., Cox C.K., Case S.T.;
RT "Structure and polymorphism of the Chironomus thummi gene encoding special
RT lobe-specific silk protein, ssp160";
RL Gene 223(1-2):347-354(1998).
XX
RN [3]
RP 1-3693
RA Berezikov E., Blinov A.G., Scherbik S.S., Cox C.C., Case S.T.;
RT ;
RL Submitted (05-DEC-1997) to the EMBL/GenBank/DDBJ databases.
RL Biochemistry, University of Mississippi Medical Center, 2500 North State
RL Street, Jackson, MS 39216-4505, USA
XX
CC On Mar 4, 1998 this sequence version replaced gi:2707296.
XX
FH Key Location/Qualifiers
FH
FT source 1..3693
FT /chromosome="IV"
FT /db_xref="taxon:7154"
FT /organism="Chironomus thummi"
FT /strain="German"
FT /map="A2b"
FT /dev_stage="larval"
FT /cell_type="lobe-specific secretory"
FT /tissue_type="salivary gland"
FT CAAT_signal 84..87
FT /gene="ssp160"
FT TATA_signal 169..172
FT /gene="ssp160"
FT mRNA join(198..288,604..759,825..2408,2874..3129,3188..3241,
FT 3299..3569)
FT /gene="ssp160"
FT /product="special lobe-specific silk protein ssp160"
FT 5'UTR 198..234
FT /gene="ssp160"
FT CDS join(235..288,604..759,825..2408,2874..3129,3188..3241,
FT 3299..3441)
FT /codon_start=1
FT /db_xref="UniProt/TrEMBL:O44416"
FT /note="160 kDa secretory protein"
FT /gene="ssp160"
FT /product="special lobe-specific silk protein ssp160"
FT /protein_id="AAD11516.1"
FT /translation="MNIKVILVCALVAIFFAQVAEGGPIANFVGFIISLLFSLFEVMLS
FT VVFDVKSFTSLSNATANATMPGFASSVGGGRFTVIMKGTFNLIAMISANIQAIQSGSGS
FT ASSNSSSSANSTTSSNSTTSSNSTTSSNSTTSSNSTSSGLTTGASVVSLIDTCAWVYQD
FT SSVGIAYLMVSILALFYGQSVSAPPYADLGIPALPANTSGAGVPQSVQIKAAITYINVT
FT INFITLTGQQFEDLQGPVTTDCGCPNTTSVAPLVAEWEAIMAALEAFASGSASSNSTSN
FT STSTSNSTTTSNSTTTTNSTTSTNSTSSSNSTTIAGSIDIAANLTVALQNLQALLMQEA
FT TCAPCLAANAKKSGVREFGPCKAAGSSCARSGQRKVKRKARLEKMRAKSRRAVGNRKGS
FT MKKRVRSRAKKFGKAAKSGVRRYRKNIKFVYIPPVMASLNAYAALMASLSDSISYQSES
FT ALNSTDSACNSTSNSTDEAVINATTAVTDMFVNFTAMVINNTVAHPNCTQYADMALSMV
FT SQINEQIIACGSQSDSAQSSIYANVTISIVAMAQEYNNFASMSDKCTRSFANSWLWMYI
FT KWVFYRMGMTSGVPNFLACQTKAQSSLTAFLASFNATVSATISAASANNSEVQSSEAAC
FT IESSLAEAAVILEMFEAAYQNCTDPGSVTVPAETTTTTSTTTTTTTTTTTAAPTTTTTK
FT AANAPFTYPLCTLIMSTTCSLGGAGCTYPLISSAGCCPSGKTLNTGLGGRGCCK"
FT 3'UTR 3442..3569
FT /gene="ssp160"
FT polyA_signal order(3520..3523,3532..3537,3539..3544)
FT /gene="ssp160"
XX
SQ Sequence 3693 BP; 1171 A; 768 C; 633 G; 1121 T; 0 other;
aagctttcaa ctctcattta aacctaaata agcacatcat atccacaatt catcagccaa 60
taaaaattca ctttatttta atccaatcaa agaaagtttc acgatgtcaa aaacattcgt 120
ggatgtcccg tcaagtggaa ggagaaacga aaattcacga aatttcacaa taaaaagtga 180
gtaagttgtg tggtccatgt catatcgatc taatttatcg aatagtgata aaatatgaat 240
attaaagtga tcttagtgtg cgccttggtt gcgatcttct ttgcacaggt aagttggtaa 300
cttgggttgg gatcttcttt aaatttgact agctttgtac aagatatgag ttgtatagtc 360
tgtagttgta gtgtcatggg ttgtatactg tcttgtaggc taggttttgc ggctcttgca 420
caaatatatc ttaaaaagat cttaaaagtc aacgagagtg ttcaataacg tgatcaataa 480
caagcccatg atacgtctca gctccttaaa tccaccaaat atgactcata tacagacaca 540
accctaatct taaagtacta agcaatttta atcacaattt taaattttcc acatcttatc 600
caggttgcag aaggcggacc aatcgccaat tttgtaggct tcatcatctc cctcttgttc 660
tccttgtttg aagtcatgct gtcagttgtg ttcgatgtca agtcgttcac aagcttgtca 720
aatgccacag caaatgcaac gatgcctggt tttgcatctg tgagtatttt tagctatagc 780
ttgacctgca aaatccttga taaatatgtt gattccattt ctagagcgtt ggtggtggtc 840
gcttcacagt catcatgaaa ggaacattca atttgattgc catgatatcg gcaaatattc 900
aagccattca gtcaggatca ggatcagcat cgtctaattc ctcatcaagt gctaattcta 960
caacatcctc aaactcaaca acaagctcaa actcaacgac atcctcgaac tcaacaacaa 1020
gctcaaactc tacatccagt ggattaacaa ccggtgctag cgttgtaagc ttgattgata 1080
cctgtgcttg ggtctatcag gacagttcag ttggaattgc ctacttgatg gtctcaattt 1140
tggcactttt ctatggacaa tctgtctcag caccgccata tgctgatctt ggtataccag 1200
ctctaccagc aaatacctct ggtgctggag ttccacaatc tgtacaaatt aaagcagcaa 1260
ttacttacat caatgttact attaacttta ttaccttaac tggtcaacaa tttgaagatt 1320
tacaaggtcc agttaccaca gattgtggat gtccaaatac aactagtgtt gcgccacttg 1380
ttgctgaatg ggaagccata atggctgctc ttgaagcttt cgctagtgga tcagcatcat 1440
ctaattctac atctaattca acatcaacaa gtaactcaac aacgacaagc aactcaacaa 1500
ctacgacaaa ttcaacaact tcaactaatt caacatcctc gtcaaattcg acaacaattg 1560
ctggatctat tgacattgct gctaatctta cagttgccct ccagaacctc caagccttgc 1620
tcatgcaaga agctacttgt gctccatgcc tagctgcaaa tgccaaaaag agtggtgttc 1680
gtgaatttgg accatgtaaa gctgctggct catcatgtgc tagatcagga caaagaaaag 1740
tcaagcgtaa ggcacgattg gagaagatgc gtgccaagtc ccgtcgtgca gtcggtaaca 1800
gaaaaggatc aatgaagaag cgcgtccgta gtcgtgcaaa gaaattcgga aaggctgcaa 1860
agtcaggagt tagacgatac cgcaagaaca tcaagtttgt ctacattcca ccagtcatgg 1920
cttcacttaa tgcatatgca gcattgatgg catctttaag tgacagcatc tcatatcaat 1980
ctgaatcggc tttgaactca acagactctg catgtaactc aacatcaaac agcacagatg 2040
aggctgtaat taatgcaaca accgctgtta ctgatatgtt tgtcaacttt actgctatgg 2100
tcatcaataa tactgttgca catccaaatt gtactcaata tgctgacatg gctctttcaa 2160
tggtctctca aatcaacgag caaatcattg catgcggaag tcagtctgat tctgctcagt 2220
catcaatcta tgcaaatgtt acaatcagta ttgttgcaat ggctcaagaa tacaataact 2280
ttgcatctat gtctgataag tgtaccagat catttgccaa tagttggttg tggatgtaca 2340
ttaagtgggt cttctatcga atgggaatga cttctggagt tcctaacttc ctcgcttgtc 2400
aaactaaggt ttgtgattta cttaacaaat acttgaaact aaacgtatcc cttagaactg 2460
aacttatcat tagaaattga acttatcctt taaaaactga acttatcccg agaaaagaaa 2520
tgtatcctta gaaacgaaat cggttttaaa aactgagctt attcttcagg aactaaactc 2580
atccttagaa actgaccata tccttaaaaa ctgaacgtat tcttagaagc taactcatta 2640
ttcagaaact gaacttgacc ttagaaactg aacatattct tcggactaaa ctcatcctaa 2700
gaaactgacc gtatccttaa aaactgaact tagaagctga actcattatt cagaaactga 2760
agttcaccct tagaaactga acttattctt caggaactaa acttatcctt tgaaactgaa 2820
cttatcctta aaaactgatt ttactgagtc cttctttaat ccttcattaa taggctcaaa 2880
gcagtcttac agcattcttg gcatcattta atgccacagt cagtgccacg atttcagcag 2940
caagtgcaaa taattctgaa gttcaaagct ctgaagcagc ttgtattgaa agtagtcttg 3000
cggaagcagc cgttatttta gaaatgtttg aggcagcata tcaaaactgt acagatccag 3060
gatccgtaac agttccagca gagactacaa caacgaccag tacaaccacc actacaacta 3120
ccacaacaag taggttaaaa ttggaaaagt ttagaatttt gtgtgcaatt tttttaattt 3180
tttacagcaa ccgcagcacc aacaacaacc acaactaagg ctgctaatgc accattcaca 3240
tgtaagatat gaaatcaaat tgtgactttt tctaagaaat tgtttccttt ttttctagat 3300
ccattgtgta ctttgatcat gtcaacaaca tgctcactgg gtggagcagg atgtacatat 3360
ccacttatct catctgctgg ctgctgtcca tctggcaaaa cattaaacac tggtctcggt 3420
ggacgtggtt gttgcaaata aaatctacag cgacagttaa attgaagcaa ttattttttc 3480
ctatttcttg atgtagaaca ttttttgtac ttaattttga taaaatgtgg cattaaacat 3540
ataatctgaa atgtggacga gaaactttat tttaaactat ttatttattt tttaatcttt 3600
tcagaaactc aatttatccc ataggaactg aacttatcct taataaactg gtcttatctt 3660
aagcaacaaa acgttttctt ttcaactgaa ttc 3693
//