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CJFIELDS / BioPerl-1.6.920 / t / data / humor.maf 
##maf version=1 scoring=zero
a
s NM_006987 0 5000 - 5000 gcacagcctttactccctgactgcgtttatattctgcctctcccgtgcctgttggtccttggggacGGCCCTCCGGCAGGTTCTGGCCTCAGGA--------CCCCGCACCAGCCCCGGCC-----GTGCCAGCTGCCCTCCCACTGGCCTGGCCCAGCTCTCCAGAGAGGCTTCATGCAGCCAGTTCCCCAGGGAACACCGTTGCCCACACGTTGCTAATGT-TAAAACATGAATTTATTGCATCTGTAGCATCTTACCTTGAGCACGGCTTCTTTCAATGCTTTTATTTTGCAATTATAG----GTTTATTTTCTTCCTT-----TCCTCTCTCTTGAGCTTTTTAAGGTGTTTTCTGTCACTCAGCTGGAGACTTTAAATTTCCTATTTATATTAATTATCAAATTA------TTTCATATATGA---GTCATTCAGCTCAGCCCTTTTTGGCTCCTTCTTGCAACTCTTACTTGTGGATTTATTGGGCAGTTCAGCGCCTACTTTCATG------------------------GGCAGA---CTCAACTGGCGA----GATTTTAACTGGAGGGTGAGAGATGTCCT------------GGCCACGGGGCCCTGTTG-----------------------CTCACAGTC--------------------------------------CCTGGATCAGAGGA--TGGTGCC---------------------GGATGGGCAGGTGCTGAGGATGCACATACCGCCCTCGGGTTA--------GCACCGAAGGTTCTTGTGTCAGACGTGAGGCTTCCTTCCTGGGTTCTTTCTGGCTGCGCTAGTCCAGAAGACCAGCAAACCCGAGATGGTCTGAGGTGGACGATGGAGCCTGAATGGAGAGCCTGGGGCGTGAGCCAG-GGTCTGGGATACCCTGGGACAGAGTTAGATGCCCCTGCAGACGTGGATGAGCGGCTGAAGACTAAGGGAGCAGGTCACACGTGGTGACAGACAGGAGAGGCTGCTGTGCCATCCAGGGGCTGGGGAAGGAGCCCCCG-TGGAGAGGCTCCATTTCGGCCACGTGGCTGCTGCAGACAACCGGGAGTCAGCGTCGGCACAAACACGGGTGCCTCGAAAGAGAGCAGTGCCGGCC-TGGTGTCTCCGGGCCCAGCTGCCACTGGCACAGGCCTCCGAAGGGGCAGGAGCAGGAGCAGGAGCAGAAAGCGCACA-TCAGGGCTcatgctgtgcctgtgaagatgtcgggcacgtccgttagtgtgtgtggtgcgcggtcgcctgtgaagacgactgttagtgtgtgtggtgcgtggtcgcctgtgaagacgactgttagtatgtgtggtctacggtcgcctgtgaagacgactgttagtatctgtggtgcgcggtcgcctgtgaagacgactgttagtatgtgtggtctatggtcgcctgtgaagacgactgttagtatctgtggtgcgcggtcgcctgtgaagacgactgttagtaagtgtggtgcgcggtcgcctgtgaagacgactgttagtaagtgtggtgcgcggtcgcctgtgaagacgtctgttagtaagtgtggtgcgcggtcgcctgtgaagacgactgttagtAAGTGTG-GTGCGCGGTCGCCTGTGAAGACGACTGTTAGTAAGTGTGGTGCGCGGTCGCCTGTGAAGACGACTGTTAGTGTG----GTGCGCGGTCGCCTGTGAAGACGACTGTTAGTAAGTGTGGTGCGCGGTCGCCTGTGAAGACGACTGTTAGTAAGTGTGGTGCGCGGTCGCCTGTGAAGACGTCTGTTAGTAAGTGTGGTGCGCGGTCGCCTGTGAAGACGACTGTTAGTATGTGTGGTGCGCGGTCGCCTGTGAAGACGACTGTTAGTATGTGTGGTGCGCGGTCGCCTGTGAAGACGACTGTTAGCAAGTGTGGTGCGCGGTCGTCTGTGAAGACGACTGTTAGCAAGTGTGGTGCGCGGTCGCCTGTGAAGACGACTGTTAGCAAGTGTGGTGCGCGGTCGCCTGTGAAGACGACTGTTAGCAAGTGTGGTGCGCGGTCGCCTGTGAAGACGACTGTTAGTATGTGTGGTGCACggtcgcctgtgaagatgtcttttagtaagtgtggtgcacggtcgcctgtgaagacgactgttagtatgtgtggtgcacggtcgcctgtgaagacgactgttagtaagtgtggtgcgcggtcgcctgtgaagacgactgttagtaagtgtggtgcgcggtcgcctgtgaagatgactgttagtaagtgtggtgcacggtcacaCCTTCCCACACAGTGCAGGTGACttactcagggctctggatggcaaatgacaa----ggacccaattcaaactagcataagcaaaaaggcagctctgtgggcctggca-cctggggatcaaaacagtcgttcaggcacggctggatccagccattgaccatgggtatgaggtgactcaccttcatctctcagctctgtttagctgcaccggcagacaggccgtttc-aagggggagccaggtggctactggccatcgtgagctagtgccg-------tgcttaccgtcccag---------------------------------------------acagtgggtt---tattgca--------------caggaactctggcaag--accccaggaggactcagtatggctgggtctgggtcacatgcccagccctgagccaattaccctgccttgggggtgg-----------ggctattctaattggtcaTCCTCATCACATTCACCCAGGAAGAAGGGGAAGG-AGGGGCTGTTTCTCTTGCCCAGGAAGACTGGGCGTGACTACTTTGACCTGAAGAGTTATTCTCAAAAAGGAAAGGAATGCTGGGTAGACAAAATATATGCCCATTGCAGAAGGCCAGCAGGGGCCCCTGGCCTTCGCTTTGCTAAAGGTGGC-----------------AGGTGCACA--GCTGTCCGGACCCTGGAGCTCAGTGTGAGGAGTGTAAAGGTGTAGAAGGTGCCGTCTGTGCAGCAGTGTGGCGGCGTTCTGCCTTTCTCAGCTGAATGGAAGACAAACACTCAGGCCTCTTCACACCTTCGTGACTGGTCCCCCCTGGACCTTTGCGCAGAGCTGGCCTTTC--------CATGAAGCAAACTCTGGGCACATGTGGAA-----ACCAGCCTCTTGCTGCCATGCCTGCCCCAGGGACTGACCAGGGTCGGCTCCAGTCACTGACATAGTTTATCACATCTCTTTGGCCTCTGGTCTCTGGATCCACACCTCTGGCTCTGACGTCTGCATCGAGCCCCTGTCCCTGCTGGGTTCA-AGTCTCTTTTCCAGAAGCTTCACTTGGCTCGAGGCTCCACTTGAT-TTGGTG-TCATTTGC-GTTTCTGAGCTTGGTCCTCCCGACCTGTGGTCCTGCCAGGGGAAGAGCAGCGTGGCCTGGCTGGACCCTGGCAAAGGAGGCTTCTCTTCTGCATTTCTTCTACACGGAGTGCATGAGCAGGACAAAGACCAGCTGATTCCTGCAGGCCTGGGGCTGTGGTGTGCGGGTCTCCCACAGGCCTTGGtatgtgtgtggtgtgtggtcccgcacactcagagatggcttccagcacattccacactttctttctttctttcttttttttttgagtcggagtctcgctctgttgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgccttccgggttcaagcgattctcctgcctcagcctcccgagtagttgggacgacagttgcccacgaccatgtctggccaagcctcagccttcccaagtgctagggttacaggcgtgagccactatgcctggcctacccatgaattttattttattttttaaattttaaggcgaggtctcactctgtcacctaggctggagtacggtggctagatcatggctcacagcagcctcaaactcctagactccagccaccctcccacctcagcctcctgaatggctggggctacagacatttgccaccacacctggctaatttttgtattttcagtagagatgggtttttactatgttggccaggctggtctcgaactcctgaccttaggtgatccacccgcctcggcctctggagtagctggggttacaggagtgagccaccgtgccagtcctccttccaccctttcatataaccagcagcgcatatcagcacttctcaacatctttactgcaggacCTTTTCTTCAAATGAAGTCTTACCTGGAAGCCTGAcagatgacgaggaaaaagctgagttgctctgggttgggctgtaataacccccttgttcccagccccctgcttctgcttgcacggtcctgaagaggggctccacacccctggctccttggaacccagtttgttgggttataataaccggccttgttcccagccccctgcttcgcctgtacagtcctgaagagggtctccacaccccTGGCTCCTTGGAACCCAGTTTGAG-------AGCCTCTTGGCAATTATATCCATCTGTCTGTCTCTCTTGTGGTAGCACCTGCTGCTGCTCCCCATGGGGAAAGGTTGCTGATGGTGTTTATTTTTTTTTTAAGCATGAAAACATTTTCTTTTTTCTATCAGTAGCTTGTTTGCACTATGAAAAGGTCAACAGAGAGATCCTTGTCATCTTCCttctccctgcaggagggtgtcagggtgtaagtgctccctcgctgtgcaggggttcatttcattcatttcatTACCCTTGCCCTCCTCGAGGTACCTCCGGGAAGCTGTTCCATTTACACATCTGTCAAGTTCTCTGTGCGTCAATTTGCCTTGCTCCTGAAGAGCCACACCCAAAAGGGGCCCCACTCCAGGCAGCGGGGCTTCAGGAAGCGATGAGATGCT---GACGCAGGCCCCGTGCACCACCACTGCTG----CCTGTAAGGGCTGTTTTGGATACAGAAAATGTGCCCTTTCTAACC--------CAAAAAA------------------------------------------------------------------------------------------------------------------------------TGCTTGAAATGTGTAAAAGTGGCCAGACT---AACAGTCCCAAAGAGGGCTGC---------CCTCTAAGAGGAAGCGTCCCAAATCTGT---TCAGTTTTAGAGACTACGTGACTGGG------GTACG-------TGGTGGGGCCTTACCAGACATCCACG---------AGGAGAATCCAGGCCTTGGTTTGGCTCCAGCTGGGCCTGCCTGGTGGCTGCCACTTATTGACTTAAGTCCCAGTGATTCAGCTCCTCATCTGGAACACCTCGGGTCACCCCCG
s mm3       0 3424 + 3424 ..................................................................GACCCCCCTGTACCCACTGGCCTAAGGAGCAACCCCACCCACAGCAGCTCTGGCCCTGTCATGCCAACCACTGTCCCACTGACCCAGACTACCCCTG-AGAAGGACATTGTACAGCTAAGTCACAGAGTAACACTGC----------------ATGTGTAACACAAGCGTGTGTT-----TGTAACAT---GCCTTCACCAAGGTTTCTTCTAATGCTTTTGTTTTGCAGTTCTAGCTGTTTTCATTTCCCTCCTTGGATCTTCTCTCTCTTGAACTTTTTAAAGTGTCATA-GTCTATAAGTTAGCAACTTCA--CTCCTTACGTGTATTAATTGTCAAATTACTTATTTTTTCTATGTGAATTGCTGTTTA------TCATCTTTGCCTCCTTTTTGCAAACTTTACGTATTCGGGGATTAAGCATTTTAGCATTTGCTCTTCTATTTAGAGACTGAGCAAGCAGTGATGGCGGAGCCCTGTGCTGGTGA-TGCATTTTGGGCTGGGAAGAGAATTCTACCTTTAGCAAAGC-AAGGCCA-TGGCCTCTGCTGTCAGTATATGATGGACGTTCATTCTGACTGTCTAGCTTCCTTCTTCAGGTGTAAGTAATCATGTCGTCCTCCTGGAGAAGATAAATTGGTCCCTGCGCCTCCCTCCTTAGGAAAGGACTGGCAGGTGCTTAAG------------CCAGTGTGTTAAGCCAGGAGCACTCAGAATCCT---GTCAGCAACCCTGCTTCTTTGTCATGATCATTCTAGGCGCACTT-TCTGGAAGATGAG--------GGGTGGTCAGAAGTGGATGACAGAGTCTCCACGTACAACCTTGGAGATAGGCCAG-GGTGTGGGATGAGCCTGGGATCTCTTGGGGATCATTGGAGACATAGGTGTA-ATTTGAAGA------GAGCAGGTCATAT-----------------------------TATCCAGG---------------------AGCTGGAGCTCTCTTTGGGCCCCATAGCTACAGCAGAAGCGCAA-AGTTAGCCAAAGAATGAACACTGGAGGTTGAAAGGAAGGTGATCTCTGCCATGGCATCTCGGAGTC----------------AGGCCTCAGAGG----ACAGTTAGCTGCAGGAGCAGACAGCTCTCC-CCAAAGCT......................................................................................................................................................................................................................................................................................................................................................................................................AAGTGAGCGTGTGCAGTGCATTCAGAAGAACAGAATGAGCGTGTGCAGTGTGCAGTGCATTCAGAAGAACAGAGTGAGCGTGTGCAGTGTGCACTGCATTCAGAAGAACAGAGTGAGCGTGTGCAGTGTGCACTGCATTCAGAAGAACAGAGTGAGC--GTGTGCAGCGCATTCA-----GAAGAACAGAGTGAGCGTGTGCAGTGTGCAGCGCATTCAGAAGAACAGAGTGAGCGTGTGCAGTGCAT-------TCAGAAGAACAGAGTGAGCGTGTGCAGTGTGCACTGCATTCAGAAGAACAGAGTGAGCGTGTGCAGTGTGCAGTGCATTCAGGAGAACAGAGTGAGCGTGTGCAGTGTGCACTGCATTCAGAAGAACAGAGTGAGCATGTGCAGTGTGCAGTGCATTCAGAAGAACAGAGTGAGCGTGTGCAGTGTGCAGTGCATTCAGAAGAACAGAGTGAGCGTGTGCAGTGTGC..........................................................................................................................................................................................................................AGGTGATTTTCTCAGAGTTC---ATGATCAATCACAAATACGACTccagctcaaactacctgaagcaaaaatgggactctgcgagtctggcaaactgggaaccataaaagtgggtcaggcttggctgcacccagtgactgacaatatcttcaggcgtattcgcctccttccgtcgacttctctaagcatggtttc-agcctggcagtttctgagaggcagcaagatggccgcAGGATTTCCCACACCAGCACCATCAACACTGTTTGCTTCCCACACTGCCACCTATCCACTGCTCACTTCCCACGTGGACACTACACACCAAGATGCTGTCTGTACCGCAGCTCACTGTCACAAAAGGTACACTTTCCAGTAACCCAGGGAAGACACACCTTGGC-----CTAGGTCACATATACAGCCTTGAGCCAGCCACTCT--CCAGGAAGTGGAGGAGGGTGATGGACATCTTAATAGGTCCCTC-AGTCATGTCCACCCCCAAGGAGGAGGAAGCAGGGAACAGTTTCTTTTCTCCAGGAGGTC--GACATGGTTAGTTAAACCTAAAGA-------------AGGAA------GCTGGGCAGGCAAGATGGGTCTCCATCACCTAGAGCTAGCAGAGGCCTCTGGCCTTTGCTTTGCTAAAG-TAGAGTTGTCTTTCCAGCCTAAGATGCACACAGTTGTCTGGATCTTGGTGCT........................AAGGCTGTCATCTGCTTAGCATTGCCACAG--TTCTGGGGTATACAGT----------GTGAACCCT-AGCAATCTTCAAGCCTTCTTGTGAGGGGCATCGTAGGCCTTCTCATGGAGG----CTTCCCACCACCCTGTGTGGGCAATCC----CTCACATGGAACCTTCACAAGCAGTAAGCAGCTATGCTTG-----GGG--------GAAATAGCTTT--TCCCTAACATGCTT------GTGTCCCAGGATGCTGGCCCCTAG-----CACCACTTGCTCT-----TTGC-------ACCTCTCCTTGCCAGGCTCATGGTCTCTTTG--AGATGCTCATCTTGGCTCAGATCACAACCAGATGTTGGTG-TTACCTATAGTTTGTGGACA-GGTCCATCTGGTAGGTGGAGCTGC-AGGGAATGGACAGAGCAGCCAGGCTGGGCCCCGACAAAGGAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTCTTCAAGTGGAGTCTTATCTGGAAAGCTGA.............................................................................................................................................................................................................aGGCTCCTTGGAACCCCGATTGAGGATTGAGAAGTGTTGGGTGGCTATGCTCATTGGTCTCTC-----------AGAATCGTTTTTTACCTCCCTGGGGATAAGGTTGCTG--------------------------GAAAACATTTTCTTCCTTC----ACTAGATTGTCTGT--TATGAAAAGGTCACTTGTGATCTCCTTGTCATCCTCC.......................................................................TGCCCCTGTGCTGGGCTAGCTGCCTTTGGGGATTTGTTCTTCTACTGCACTGCTCAAGTGGTCAGGGCCTCAGTTTCCCTTCTTCCCAAGAAGCCAGAGCCA---GAGGCTCCACTGCAGGC-----GACTCTGGTAAGCTCTGTGATGCTCACAACTTGGGCCCTG----CCAGGACGGATAATAACTTTTGAGAAATGTCT-------AAAAGCTAAGTCCTTTCTAACAACAACAGACAAACAAACCCTTCAGTGCTGGCAGGTCCCTcatgtttataattccaatcactgtgaaggatgaagcagtaagatcctgggttctaggccagcctgggctactcagcaagatcctgtctcaagaaatgacaaaTGTTTCCAATTTGTAT--GTGTCCAGACTGAAAACACATCCGCGAGGGGATGTAAGCTTCTGCCTTGGGTGGGAAATACCCCACAATTGTCTGTCAGCTGCTGCCACTGTGGGACTTGGTCTCCAGTACAATAGTGCTGGGGTGGCTTGGCCCGGCTTCCCTGCACTAGGGAGAGAGAATCCAGGCCTGGGTTTGGCTCCAACTGGGCCTTGCAGG--GCTGTTACTTATTGAGTTAAGTCAGAGTGGCTCAAATGTTGATATGCAGCACCT-GGGTCACCCTTG
s rn3       0 1951 + 1951 ..................................................................................................................................................................................................................................................................................................................................................GAGCTTTTTAAAGTGTCAGA-GC----AAGTTATCAACTTCA--TTCCCTATGAGTATTAATTATCAAATTACTTACGTTTCCTATATAAATTGCCATTTA------TCATCTTTGCCTCTTTCTTGCAAACTTTGCGTGTTCGTGGATTAAGCAATTTAGCGTTTGCTTTTCTGTTTAGAGAGTGAGCAAGCAGTGATGGCGGAGCCCCGTGCTGGTGCCTGCAGTGTGGGCTGGGAGGAGAAGGCTAACTTTAGCAAAGCGAAGGTCA-GGGCCTCTGCTGTCAGTATGTGATGGACAGCCATTCTACCTGTCCAGCTTCCTTCTTCAGGTATAAGTAATCACGTCATCCTCCTGGAGAAGATAA-CTGGCCCCTGCCCCTTCGTCCTTAGGAAAGGACTGACTGGTGCTTAAG------------CCAGTGTGTTAAGCCAGGGGCACTCAGGGTCCT---GTCAGCAAGGCTGTTTCTTTGCAGTGATCATTCTGGGTGCAGTC-TCTGGAAGACAAG--------GGGTGGTCAGAAGTGGATGGCACAGTCTCAGTGTACAACCTGGGAGATGGGCCCGAGGTCTGGGAT---------CTCTCTTGGGGATCATTGGAGACATAGGTGTG-ATTTGAAGA------GA-CAGGTCAGAC-----------------------------CATCCCGGGACCACAGAGAAAGCACATGGAGCTGGATCTCTCTTTGGGCCCCATGGCTACAGCAGAAGAGCAA-AG----------AATGAACACTGGAGATTGGAGGGA------TCTCTGCCATGGTGTCTCTCAGCC----------------AGACCTCAGAGG----AGAGTTAGCTGCAGGAACAGACAGCTCCCCACCAGAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTCCATTCTGCCTAGGTGATTTTCTCAGAGTTC---GTGATCAATCACAAATAAGAGTCCAGCTCAAA--------AGCAGAAATGGGACTCTGTGAGTCTGGCAACCTGGGAACTGTAAAAGTGGGTCAGGCTTGGCTGCACCCAGTGACTGACAATATCTTCAGGCATATTTGTCTTCTTCTGTTGGCTTCCCTAAGCATCATTTCCAGACTGGCTGCTTCTGAGAGGGGGCAAGATGGCCACAGGATTTCCCATGCCAGCACCACCAGCACTGTTTGCTCCCCACG---------------------------------------------ACAACACTGT---TACCACAGCTCACCGTCATGAAAGGTATACTTCTCAGTAACCCAGAGAAGACAAACCCTGGC-----CTAGGTCACCTG--CAGCCTTGGGCCAGCCACTCT--CCAGGAAGTGGAAGAGGGTGATGGATATCTTAATAGGTTCTCC-AGTCATGTCCAACCCTAAGGAGGAAGAAGC--------------------CAGGAGGAC--AACCTGGTTACTTAATCCTGAAGA-------------AGGAA------GCTGGGCAGGCAAGATGGTTGTCCTTCACCTAGAGCTAGCAGAAGCCCCTGGCCTTTGCTTTGCTAAAGGTAGAATTGTCTTCCCAGCCCAAGATGCACA--GCTGTCTGGACCTTGGTGC------TGCAGGGTTGAA-----TTAAGGCTATGATCTGCTTAGCATTGCCACAG--TTCTGGGGTACACAGT----------GTGAACGCT-AGTAATCTTCATGCTTTTGCGTAAAGGGCATCTTAGGCCTTCTCATGGAGG----CTTCC--------TGTGTGGGAAATCC----CTCACACGGCACCTTCACATGTGATAAGCTGCTATGCTTG-----GGG--------AAAATAGCTTT--TCCCTAACATGCTT------GTGTCCCAGGATGCTGGTCC-TAG-----CACCCCTTGGCCT-----CTGC------TACCTCTCCTTGCCAGGGTCACAGTCTCTTTG--GGATGCTACTCTCAGCTCAGATTTCAACCGGATGTTGGGGGTCACCTCTAGTTTGTGAACA-AGTCTATTTTGTGGGTGGACATGC-AGGGACGGGACAGAGCTGCCAGGCTGAGCCCTGACAAAGGAGGCACC----CGGTATGGCTTCGGAGCTCTCTGCACGCGCACAGCAA----CTTCCTAGTCTTGCTGCTCTGTGGCAGCTGCA--------CCCCACAAGCCCTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTCCTTGGAACCCCATTTGAG-------AAGCTCTGGGTGATTGTGTCCATTGGTCTCTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

a
s NM_018289 0 5000 + 5000 tttgtccatgttggtcaggctggtctcgaactccccacctcaggtgatccacccacctcggcctcccagagtgctgggattacaggcgtgagccaccgtgcccagcctggaagttgttttttttGAGCCCAGCTCATTTGTGAAAATATCACGTGCTCCTTATTTTCATACCCAAATTTCTCATATCCATAAACTTCCACATTTTATTTCTGTCAGAAGTATACAATCTCTTTCTAGATTTCCACCTCCTGTCAAAGGTATTTCCTTCTTTTGTTTGACATAAATGAATCAATCTAGTCTGTTATTACTTA----AAGAAGTT--------TTTTAAAACCCA----------------------------------------------------------------GTGTGT----------------------------------------------------------------CAACCTATCTCTC--------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTCTTTTAACTTCCTTTACTTCTTTGTACTGCATAACTCTCCTAAACTCAAACTTATATTATTAGTAGCTT----ATCTGCAAAGAGGGAGAAGGGGTATCATGGAGTTGGGAGCTCCAGAGGAGGCAAAGGTTTTGGGTCACGGGAGAGTGCCATTGAGAACGGACAATGGATGCTGAGAAGGACAATGAGAATCAGTGGAAATAAGGCAACAGGAATTTGTGCTGAACATGGTCACCCTGGTTTCATGATTCTCCACAACAATATGGGAAGCTCAGAGGCAAAGAAAAAAACAAAAAACAAAAAACAGAGAGACCAGGGCTGATGGCAGGCATGGtaaacct-ggtcatgcccctcctctgcttacagtccgtcagaggcttcccattccttcaagaagaccttccagatccttcaccgtccggcagtgcccatttctccagcttcctcgtgtatcactctcccttgggctttcaaacttccatcaccctggccgactcttttcatactcatggcttttgcacattctgttccttttatctatgtgttatcttcacttccaacccttggcttcagcttaaaaa--tcacttcctcagaaaagcctttcctggccgggcttgatggctcacacccgtaatcccagcagttagggaggtcaaggcaggcggatcacctgaggtcaggagttcaagaccagcatggccaacatggagaaaccccgtctctactaaaaatacaaaaattagccgggtgtggtggcgtatgcctgtaatcccagctactcaggaggctgaggcaggcgaatcacttgaatccaggaggcggaggttgcggtgagccgaggtcgcgccattgcactccagcctgggcaacaagagagaaactctgtctcaaaaaaaaaaaaaaaaaagaaaaaaagaaaaagaaaaagaaagaaaaggctttcctgacccctaatccaatcagaactctaaccatatagtctctcaacatgtgctttacttctcttttatcggatctatcacaattatatgtttatttgtacaaatgcccttttcatacatagaaatagctctgtagaggcaagcatggggtctattttgttcactgctgaattcccggcacctagcttgagtacctgtcgctaacaggaacaggtgttcaataaatgtattgactagcttaatgaaCGGCAGGAAGACTtaggtatacggccttaggcaaatttttattttgttgcttgttttaactagatcttca-tctccta-tctgttagatgggtatagtaataaaaactaacaacctc--agaattgctgtgtgaattaaaagagacaatgcatgtaacatgcttcgaatggtacctgtcatatagtaagggctaggaaattttccttcttattATCATCATTAAAAATAAGCTCTCTgagcaaacagaactctcatacattgctggtagcaatgtgaaagtgatacagccactttggaaaacagtttaccagtttcttagaaagttaaacacagacatatcatataacacagcaatcccacatctacatatttacccaagtgacatgaaaacttatgttcacacaaaaatctgtacatgaatgtttatagcagctttattcataattgccaaaaactggaaa-aacccatatgtccttcaa-ccaggga-ctagataaacaaatagtggtgtattcatctagtggaataccagcaagaagacatgaa-ccacagatacatgcaacaacatggatgaattttagatactttatgacagatgaaagaagcca-gactgaaaaggtgtcatactgtatgattccatc-----------tatatgatattctggaaatatcaaaactatagggacaggccaggcgtggtggctcatgcctgtaaccccagcactttgggagcctgatgctggcagatcacctgaggtcaggagtttgagaccatcctgggcaacatgatgaaaccctgtctctactaaaaatacaaaaattagccaggtgtggtggcacgtgcctgtcatcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagattgcaccactgcactccagcctgggtgatagagcgagactccgtctcaaaaaaacaaaaacaaaaacaaaaactatagggacagaaatcaagtcagtggttgccagtggatggggtgaggcaagagggaatttggggga--atgaaattgtcctataactagattgtggtagtagttacatggttatatacatttatttattttgttttattattgttttcttattatttgtttgtttgttttgagatggagtcttgctctgtcacccaggctggagtgcaatggtgcaatcttggctcactgcaacctccacctctcgggttcaagtgattctgtgcaccaccacggccagctacgttttgtatttttagtagatagagacgggttttaccatgttggccaggctggtctcgaacccctgacctcaagtgatctggcagcctcggcctccccacgtgctgggattataggcgtgagtcaccatgcccagtcgtttatacacatttatcaaaactca----ctgcatcataaattgcaag-agtaaattttactgtatgtaaatatcttaatTTTTTAAAGGAAAAAAAAAGTCCAAAATAAGTAGCTATAATTACCTTTTCCTTTTAGAAAAAGGCATTCATATTTTCTGAGCATGAGAGAACTACAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTGTAGACATTTGGGAAAATGTACAAAGGATGTACATTCATCACGTGCAGAAAAGTAATATTTCCTTGCTGTGAGCTTT--ATTGGCACAG-------------------------------------------------------------------------------------------AATACACacaaagctgggaccatgctatgcattttttaaatgaaattatacattttgctttctgaaatatattgtgcatat-ttttcatgtcattaa----ttttcaaaatcatgattttatgaatcaataatattctatgtttacttaagagacagagtctccctttgtggcccaggctggagtgcagtggcgcaaaggaatcattcctcactgcagcctcaaactcctgggctcaagcgatcctcagtggtgggatgagatctagacccctgatattcaatctcagaaagtcaataattccctgcctcagcctcctgagtagctggggctgcaggcctgtgccactgcaccaggttcaatgtatattttattttgtctttTTTTTCTTTTTTTAATGTATATTTTTTAGCA---TTCCTTTGTTGTTAGAAATTACATTGtttatata--------------------------------------------------attattatttgtcaattaaaaa----------taaaagaaaaaatCATACTGCTCCTATTTTTTACTTTGAGCAACTCTGATAACA-------------ACAACAAAAAAAAGTTCAGTGGGGCCAACGCGTTTCCCTCCTGGAGTTTCCCG--GTTCACCTGGTGGAGCGGGTCCTCCTTGGGCTGCAATTCCCTCCTTCTTTTCAGTGTCTGCAGGAAAGGTGGTTTCACAGGGTGATCGGTGATCTGGCTTATTTGTTCCTTTGTGGGGGTAAGGGCTGGGCACCTCACTATTTCCTGTATTACCAGCTTGAATTTACATCGCGCTGTTAATGTTTAATCCTCTCCACATCGA----------CGCGGGGTag-------taatttgttccaagtcacacaacttatcaatggtggactattcaggacttagatcccggatattcaacctcag----tAAACGTCTCCCCAGCTCCAGGGCGCTGCGTCATCTGGCTTTAAAAAAACGTTTCTggccgggcgcagtagctcacgcctgtcatcccagcactttgggaggccgaggcgggcggatcacgaggtcaagagttcgagaccagcctggccaacatggtgaaacctcgtctccactaaaaatacaaaaattagctgggcgtggtggcgggcgcctgtaatcccagctactcgggaggctgagacaggagaatcgcttgaacccagcaggcggggttgcagtgagccgagatcgcgccgttgcactccagcctgggcaacaagtaagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaagaCGTTTCTCCCCA------TAAGGAGGCTGCAGTCACCTCGAAAAGCTTCTGCGCAGAGCCCGGCGCACGGGGAATTTCTATCGAGTGG----GCACTGTCCCGTCCTACGAATGTCCTTGGCGACATCGCCACTCGCCAGCTGGGATCACGTCGCCCCCG-TGGCCGGGG-ACACCCGCTGCCACTGACCGAGGGGGCCCCGGGAGCTGAGAGGTCGCCG-CTGCGCTGCCCGCGGAGGCTGTGGGCTGCGGTTGGCGACGCCG-CAGGGCTG-ACTTTCATCCGGGCGTCCT-GCTGGA-GGCCAGACCCTACCCCAACCTCGGGGTCCTCAGTGCGGGGCGCGCCTTGGG-GAGGGAAGAGGCCCCGCCCATCCTAAGGACGCGCTGAGGCCACGCGGGGCCGCCGGGATACTGCGTTGCCCGGGAGACACCT---GACGTGACAGGAACGCC-GCCAGTCTCAGTCCGCCGTGATCCCACAGTTCCCCGGT-CCCGGAAGTGCCCTGGCCTGCCGGAAGTGCcggagcggctgacagagcggctgacggagcCGGGCTCACCAGGTCGCTGCCGCGAGGGAGTTGCTGTGCTGGGGCCTGGGT
s mm3       0 3181 + 3181 ............................................................................................................................AAGCCCAGTTCATTTGTGAGACTATCACACGCTC---ATTTTCATAGACAAATTATTCTTCTCTATAAACTTCCCCCTTATATTTATCTTTAAAACATAACATCTGTTTTT----------CTCCAGCCAAAGTTATTTCCTG-TTTTGCTTATTATAAA-----CAGCTTGGCCTATTGTTGCTTATCCTAATGCATTAAAAAACTTTTAAAATTAca..........................................................................................................................................................................................................................................................................................................................................................................................ATTTGCAATTAAAGACAATATAATA-TATAATGGAGTTGGGAGCTTCAGAAGGAAGAATGGTTTCCAGTTGTAGCAGATA-----TAACCACTGAAAATGGATACACAAGAGGACAAC------CAGCAAGAACCAGACAGTGTGAATGCAGCCTGGACATAGTAGCCTTGGTTTCA-GACTCTCTGTAAGAGTGCAGGAAGCTCAGACACAGAGAAAAAAACC------------CAGAGGGCC--------ATGACAG---CAGTGAGCCTAGGTCA--CCACTCCTC-GCCTCCAGTCTTTCAAAGGCTATCCATTTCCCTAGGACAGCTCTC---AACACTAAGGAGCTGGCTCCACCCAGTTCTTTAGCCTCTACTCCAACC--TCTGCTCTTGACTTTCAAAACTCTTT--------TCAAGTCTTTTCTTCCCTATGGCTCT-GCACATATTGTTACTTGGGTTT--GTCATGCCTTCTCTTCCGAA---TTgcttcagcttaaaaa--tcactctcttggagaaagcttcccc...........................................................................................................................................................................................................................................................................................................................................gcattccgcaccc-------------------------acactctctcagtgtgcactgtcctgacctagcttgggacttatcacgattacatctttatt-gtatgaatgccatctccttacatgaagttagatgtga--tgacaggcgtttgatgtatctggttctttgctgaat--tcagcaccgagcataggtgcctgtcatcagcaggaacaggtgttgaatacatttattaattgagtgaaGGAGCAACAGAA-------GCCAGAGGGTCTAGGG--------TGCTTGGTT---TGTTTGAACCAGCTctccattctctca-tctgttaaattgggattatggtaa----ttaaactct---ggaactgctttgtggattaa--gagtcaaggc-tgtagtatgcttggtatg-tacatgacatatagcaagcattaggaaacattagct---attatCACCATTAAAAGGAAACTCT--gagtatctgaaactcttagacactgtcagtaggaatgtgaaaataacac-----cctt-------------------ccttataattgtaaacacagacagaccataccacttagcaatcttactcctaggcatacacttaagcgaatgaaaaactta------cagaaaactttagacaggaacgtttatagcagctttattcacaacgtctcagaatttaaaacaactcggatgttttccaaatcaccta-gtagatagacaaat---------------caacgga------gcaagaa---acaaa-ctgatggcacaaataataacacagatgaatcacagatccacgatgctaagtgagagaagacaagagtcaaaaggtgacatgctgtaggactccattcctggagaatttatatgacattctggaaa.........................................................................................................................................................................................................................................................................................................................................................GCCAGTGATTTGCAgacaatagagtg-ggtgtgaagga-----ggggatgatggaagtgtctcc--gccggactgtgct-gtgctgacacgatgaca....................................................................................................................................................................................................................................................................................................................acatgcatttatcaaagctcatgtacagcactggaaaccggaaacggctaatctcactgcatgcaaat-tctatctaatttaaaaTAGAAAAATAAGGCACGATAA--AACTGCACATTCCTGTTCCTTCAAGAAgACAGCACCTATGGTTTCTGATAATAAAAGTACCATATGGAGAAAAAAAAAAAAAAAagctgggcagtggtggcgcatgcctttagtcccagcacttgggaggcagaggcaggcagatttctgagttcgaggccagcctggtctacagagtgagttccaggacagccaaggctacacagagaaaccctgtcttgaaaaacaaacaaacaaacaaacaaacaCAAAAAAAAGTACCATATGTTGATTGTAGATGTGTGGGAAAATAAAGAAAAAATATA--------------------------TTTCCCTGTCATTTGCTTTTGGTTGAGACAG-------------------------------------------------------------------------------------------..............................................TAAATATTCTGCTTTCTGAAATACACTGTGCATATATCGCTATGTCATTAAATAATTGTCAAAATAATACTTTTATGAGTCAATA...........................................................................................................................................................................................................................................................----------------------------------TGTTGCTGTTGCTAAAACTTATACTACTCACACATTTTTGGGGGGCAAACTAAAACAACAATAAAATTCCATTCCTAAAACTATAATGTTTTTTAAAAACTAAAAA----------AAAAAAAGCAAATTATATTATTCCTGA-----------AGCAATTTTTATAAAACTATATGTACGGAAAAAAAAAAAAAAGTTCAGCAGGGCCAGATACTCCTCTGTCGAGGTTTTCACAATGTTGAACTGGTAAGGCAACCCTTCCCTTGGCTGCAATTCCATCATT-GTTCCAGTGCCTGCTGGAAAAGCGGTTCCACAGGGCTATC-------TGGCTCCTCT----TTTTGTAATGTACGCGGCTAAACACCCTAACATTTCCTGTACTACCTGCCTAAGTTTGCATAATACT-TCCATATTTAATG-TCACCCCATCTAACGTAGTGTAAGCAGGGCAGATGGGAATACTTTGTTCAAGATCATA-AGGTTATCAAGGGTGTA--AATAAGGATGTACAGCCCGGACATTCGGTCTCAAAAACCAAACACTTCCCA---------GCGTTGGGTCGCT----------------TTTCT................................................................................................................................................................................................................................................................................................................CCTTACTCCCCACCCTAGCGAGGAGGCTTCAGACAA----------TTCTGCCCAG--------------TAGATCCTTATCTAAGGAGCAGAAGCTCTCCCAAACCTCAAATGTCTTTGGCAACACTGCCACTTACCAGCTGGGGTCATTTCACTCCCGATGGCAGGGGGACACAGACTGCCCTAGACCAAGGGGATCCAGCGAGCGGGTTGCACGTTGGCTTCATGGCCAGCGGGGCTTATTGCCCATCCATTGGGACACTGCCGTGGCTA-CCGCTCTCTGGGGCGCCCG--------GGC--GACACTAC------------GGCGCTGGTGGGGGATGCGCCCTGGGCGAAGAAGAGAGGGCTTTCAATCTTAAGAACCCGCCGCGTGCGAACAGGGAACTTGAGGTTAAGGGTTGTCTGGAGATTTTCCAGGGACTTGACAGCCATGCCTGCGGAAGTCAGTCCTCCGCTATCCCAGAGTCCCCCGGTTCCCGGAAGTGCCCAGTTCT-CCGGAAGTGCCAGGCTAGCCGAGTAAGTAGC-----------GGCTCCCTCGAGCCCCGTACCTGGAGGCTTGCTCTTCTGGGGTCCTGGT
s rn3       0 3320 + 3320 ............................................................................................................................AAGCCCAGTTCATTTGTGAGACTATCACATGCTC---ATTTTCATATACAAATTATTCTTATCTGTAAATATCCACATTATATTTATCTTAAAAACATACCATCTGTTTTT----------CTCCAGCCAAAGGTATTTCCTG-TTTTGCTTATTATGAA-----CAGCTTGGCCTATTGTTACTTATCCTAATGCATT--------TCTAAAATTACATTTATTTATTTACTTATATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCTCCCTGAACTGCATATCAAGACCCTATTCAGTGGACTCGCAGGCAGTTAGGGAACTGTGTGCAGCCTGTCTCTGAAGAAATATAAGAGTGAGGTGGAGGCAAATTATGATATTTGGTTCTCTCCTTTTACCATGTGGGTTCAGGGACCATACTCAGGTCACTAGGCTTGGTGGCAAGTGTCTTTCCCACTGAGCCATTGGCCACAACAGTTTTTAAATCTAGGGTCTACCTGTGTTCTTTTAAAACAGCTTACTTTTT---ATTTTACAAACCCCCTACATT-GAACTTGCATT--TGATA--TT----ATTGTTAAAGACAATCTAATG-------------GAGAACTTCAGAGGGAAGAGTGGTTTCGAGTTGTAGCAGATAG----TGACCGCTAAAAATGGATACGCAAAAGGACAAC------CAGCAAGAACTAGAC--TGTGAATGTGGGTTGGGCATGGTGGCCTTCATTCCA-GGCTCTCTGTAACAGTGCAGGAAGCTCAGAAACAGAGAAAGAAAAA------------CAGAGGACCCTGAGCTGATGACAG---CAGTGAACCTGGGTCA--CCACTCCTC-ACCT--AGTCCTTCAGAAGCTATCCATTTCCCTATGACAACTC-----AACACTAAGCATCCGGCTCCACCCAATTCTTTAGCCTCTGCTTGTACC--TCTACTCTTGACTTTCAAAACTCCAT-GTCCTAGCTGTGTCTTTTCTTCCTCATGTCTCT-GCTCACATTGCTACTTTGGTTT--GTCATGCCTTCTCTTCCAAA---TTGCTTCAGCTTAAAAAAATCATTTCCTTTGAGAAAGCTTCCCC........................................................................................................................................................................................................................................................................................................................AAAG---------------GCATTCCACGCCC-------------------------GCACTCTCTCAGTGTGCACTGTCCTTACCTGGCTTGGGACCTATCACAATCACATCTCTATT-GTGTGACTACTATCTCCTTATGTGAAGCTAGCTTTGAGATGGCAGGCATATGATGTATCCAGCTCTTTGCTGAAT--CCAGCAGCCAGCATAGGTGCCTGTCATCAN---------GNGTTCAGTATATTAATTANNTGGGTGAATGAGCGACANNN-------GCCATANGATCTNGNGC-------TGTTTTGTT---TGTCTGAACCAGCTCTCCACTCNCNNNNTNTNNTAAGTTGNGANNATGGTNA----NNNNAANCTNNNGNNNCTACTTTGTGGATTAA--GAGTCAAGGC-TGTAGTATGCCTGGTATG-TGCATGACATATAGTAAGCATTAGGAAACATCCGCT---ATTATGGCCATTAAAAGGAAACTCTCTGAGTATCTGAAACTCTTAGACATTGTCAGTAGGAATGTGAAAATAATAC-----CCT--------------------CCTTATAATTGTAAACACAGACAGACCTTACCACTTAGCAGTCTTACTTCTAGGCATACACTTCAGCAAACAAAAAACTTA------CACAAAACTGTAGACAGGAATGTTTATAGCAGCTTTATTCACAACTTCTCAGAATTTAAAACAATG-------TTTCCAAATCACCTAAGTAGATAAACAAAT---------------CAAAGGA------GCAAGAA---ACAAAACTGATGACACAAATAATAATGTGGATGGATCACAGATCCATTACGCTAAGTGAGAGAAGACA-GAGTCGAAAGGTGACATGCTATAGGTCTCCATTCATGTAGAACTTATATGACATTCCGGAAA.........................................................................................................................................................................................................................................................................................................................................................ACCAGAGATTTCCAGACAATAGAGTG-GGTGTGAAGAAAAGTAGGGGATGATGGAAATATCTCA--ATTGGACTGTGGT-GTGCTGAGATGACAACATGCATTTAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGCACCTATAGTTTCTGATAATAAAACTACCGTATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATTATAGACATGTGGGAAAATAAAGAAAAAATAT----------------------------TTCCTTGTCATTTGCTTTTGGTTGAGAAAGTAAATTCCATATCCACCTACCCTCCATCTTCCAAGGGTTGGGATTAAATATAGACTTATACCATCACACCCAGCCAAATTTGCTCTCAAAAAATAAATA--------------------------------------------TTCTGCTTTCTGAAATACACTGTGTATACATTCCCATGTTATTAAATAATTTTCAAAACAATG---TTATGAGTCAATG...........................................................................................................................................................................................................................................................CTCTGCACTTCTGCAATTATATTTTTTAAGCAGTTTCTTTGGTTGCTAAAAATTATACTACTTACACATTTTTTTGG------------------CAAA---------CCAAAACAAAATTCCATTCCTAATACTGCAATTTTTTTTAATGAAAAGAGCAAATTATATTATTCCTGC-----------AGAAATTTCGATAAAACTATATGTCAG--AAAAAAAAAAAAAGTTCAGCAGGGCCAGATACTCCTTGGTCGAGGGTTTCACAATGTCAAACTGGTAAGGCAACCCTTCCCTTGGCTGCAATTCCCTCATT-GTTCCAGTACCTGCTGGAAAAGCCGTTCCACAGGGCGATC-------TGGCTCCTCT----TTTTGTGATGTAGGAGGCTAAACACCCTAACATTTCCTGTACTACCTGCCTAAGTTTGCATAATACT-TCCATATTTAATGCTCACCCCATCTAACGTAGTGTACGCAGGGCAGATGGGAGTACTTTGTTCAAGGTCGTA-AGGTTATCAAGGGTGTA--AACAAGGATGTACAGCTTGGACGTCCAGTCTCAAAAATCAAACACTTTCCT---------GCGTTGAGTCATTTTCCC................................................................................................................................................................................................................................................................................................................................CCCTACTCCCCACCCTAGTGAGGAGGCTTCAGACAA----------TTTTGCGCAG--------------GGGATCCTTATCTAAG------ACACTCCCCCAAACTTCATATGCCCTTGGCAACACCGCCACTTACCAGC--GAGTCATTTCACCCGCTATGGTAGGGGGTCACAGACTGTTCCAGACCAAGGGGATCCAGCGAGTGGGTTGTATGTTGGCTTCGTTGCCAGAGGGGCTTACTGCCCATCCATTGAGACACTGACGGGGCCAACCGCTCTCTGGGGCGCCCCCGCTCTCCAGC--GACACTAC------------GGCGCCGGTGGGAGACGCGCCCTGGGCGAGGTGGGGAGGGTTCCCAATCTTAAGAACCCGCCGCGTGCGGCCAGGGAACCTGTGGTTAAGGGTTATCTGGAGATTTTCCAGGGATTTGACTGCCATG---GCTGAAGTCAGTCCTCCGCTATCCCAGAGTCCCCCGGTTCCCGGAAGTGCCCGACTCT-CCGGAAGTGCCGGGCTAGACGAGCGAGTAGC-----------GGCTTTCTCGAGCCCTGTACCTGGAGGATTGCAATTCTGGGGTCCTGGT