<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
<BlastOutput>
<BlastOutput_program>blastp</BlastOutput_program>
<BlastOutput_version>blastp 2.2.16 [Mar-25-2007]</BlastOutput_version>
<BlastOutput_reference>~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
<BlastOutput_db>AL591824.faa</BlastOutput_db>
<BlastOutput_query-ID>lcl|QUERY</BlastOutput_query-ID>
<BlastOutput_query-def>gi|1373160|gb|AAB57770.1| PyrR</BlastOutput_query-def>
<BlastOutput_query-len>173</BlastOutput_query-len>
<BlastOutput_param>
<Parameters>
<Parameters_matrix>BLOSUM62</Parameters_matrix>
<Parameters_expect>10</Parameters_expect>
<Parameters_include>0.002</Parameters_include>
<Parameters_gap-open>11</Parameters_gap-open>
<Parameters_gap-extend>1</Parameters_gap-extend>
<Parameters_filter>F</Parameters_filter>
</Parameters>
</BlastOutput_param>
<BlastOutput_iterations>
<Iteration>
<Iteration_iter-num>1</Iteration_iter-num>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gi|16411294|emb|CAC99918.1|</Hit_id>
<Hit_def>pyrR [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99918</Hit_accession>
<Hit_len>183</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>209.92</Hsp_bit-score>
<Hsp_score>533</Hsp_score>
<Hsp_evalue>4.5377e-56</Hsp_evalue>
<Hsp_query-from>1</Hsp_query-from>
<Hsp_query-to>171</Hsp_query-to>
<Hsp_hit-from>1</Hsp_hit-from>
<Hsp_hit-to>172</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>117</Hsp_identity>
<Hsp_positive>140</Hsp_positive>
<Hsp_gaps>1</Hsp_gaps>
<Hsp_align-len>172</Hsp_align-len>
<Hsp_qseq>MNQKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLS-KKTSNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIPTSKSEKVMVQLDEVDQ</Hsp_qseq>
<Hsp_hseq>MQKQVVVMDEAAIKRALTRVSYEIIERNKGTKNLALVGIKTRGIYLAERLHKRILEIEGIDVPVGDIDITLYRDDLSFKDDKTREPAVHGTNIPFDINGKKVVLVDDVLYTGRTVRAAMDALMDVGRPAQIHLAVLADRGHRELPIRADYVGKNIPTSGNERVEVRLTDVDH</Hsp_hseq>
<Hsp_midline>M ++ V++DE AI+RALTR+++E+IERNKG N LVGIKTRGIYLA+RL +RI +IEG V VG+IDITLYRDDLS K EP V G +IP DI +KV+LVDDVLYTGRTVRA MDAL+DVGRP+ I LAVL DRGHRELPIRADY+GKNIPTS +E+V V+L +VD </Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>2</Hit_num>
<Hit_id>gi|16409584|emb|CAD00746.1|</Hit_id>
<Hit_def>fusion protein, N-terminal part similar to B. subtilis YacA protein, C-terminal part similar to hypoxanthine-guanine phosphoribosyltransferase [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAD00746</Hit_accession>
<Hit_len>648</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>37.7354</Hsp_bit-score>
<Hsp_score>86</Hsp_score>
<Hsp_evalue>0.000286309</Hsp_evalue>
<Hsp_query-from>4</Hsp_query-from>
<Hsp_query-to>155</Hsp_query-to>
<Hsp_hit-from>475</Hsp_hit-from>
<Hsp_hit-to>617</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>32</Hsp_identity>
<Hsp_positive>78</Hsp_positive>
<Hsp_gaps>11</Hsp_gaps>
<Hsp_align-len>153</Hsp_align-len>
<Hsp_qseq>KAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDR-GHRELPIRADYIGKNIP</Hsp_qseq>
<Hsp_hseq>QKVLISEDELQEKIRELGRELTTEYEG-RNPLVVGVLKGATPFMTDLLKRVDTY----LEMDFMDVSSYGN--GTVSSGEVKIIK--DLNASVEGRDVLVIEDIIDSGRTLSYLVD-LIKYRKAKSVKLVTLLDKPAGRNVEIEADYVGFVVP</Hsp_hseq>
<Hsp_midline>+ V++ E ++ + + E+ +G N ++VG+ L +R++ + + +D++ Y + +S + ++K D+ + + V++++D++ +GRT+ +D L+ + S++L L+D+ R + I ADY+G +P</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>3</Hit_num>
<Hit_id>gi|16411285|emb|CAC99909.1|</Hit_id>
<Hit_def>pyrE [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99909</Hit_accession>
<Hit_len>209</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>29.261</Hsp_bit-score>
<Hsp_score>64</Hsp_score>
<Hsp_evalue>0.107059</Hsp_evalue>
<Hsp_query-from>32</Hsp_query-from>
<Hsp_query-to>125</Hsp_query-to>
<Hsp_hit-from>38</Hsp_hit-from>
<Hsp_hit-to>142</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>32</Hsp_identity>
<Hsp_positive>53</Hsp_positive>
<Hsp_gaps>33</Hsp_gaps>
<Hsp_align-len>116</Hsp_align-len>
<Hsp_qseq>NNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITL-----------YRDDLSKKTSNDEPLV----------KGADIPVDITD-QKVILVDDVLYTGRTVRAGMDALVDVG</Hsp_qseq>
<Hsp_hseq>DNRLTLGFPKVRQFIAKSLAEKIKQ------TFGEIDVVAGTATAGIPHAAWVSDLL-----DLPMVYVRSKAKEHGKGNQIEGPISKGQKVVVIEDLISTGGSSLKAVEALEEAG</Hsp_hseq>
<Hsp_midline>+N + +G ++AK LAE+I+Q T GEID+ + DL D P+V KG I I+ QKV++++D++ TG + ++AL + G</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>4</Hit_num>
<Hit_id>gi|16409989|emb|CAC98678.1|</Hit_id>
<Hit_def>lmo0600 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98678</Hit_accession>
<Hit_len>196</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>28.4906</Hsp_bit-score>
<Hsp_score>62</Hsp_score>
<Hsp_evalue>0.15199</Hsp_evalue>
<Hsp_query-from>123</Hsp_query-from>
<Hsp_query-to>149</Hsp_query-to>
<Hsp_hit-from>49</Hsp_hit-from>
<Hsp_hit-to>75</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>11</Hsp_identity>
<Hsp_positive>16</Hsp_positive>
<Hsp_align-len>27</Hsp_align-len>
<Hsp_qseq>DVGRPSSIQLAVLVDRGHRELPIRADY</Hsp_qseq>
<Hsp_hseq>DLGKPEEIAADIISERGIREEPTEMDY</Hsp_hseq>
<Hsp_midline>D+G+P I ++ +RG RE P DY</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>5</Hit_num>
<Hit_id>gi|16411556|emb|CAD00164.1|</Hit_id>
<Hit_def>lmo2086 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAD00164</Hit_accession>
<Hit_len>423</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>25.7942</Hsp_bit-score>
<Hsp_score>55</Hsp_score>
<Hsp_evalue>1.0709</Hsp_evalue>
<Hsp_query-from>49</Hsp_query-from>
<Hsp_query-to>82</Hsp_query-to>
<Hsp_hit-from>281</Hsp_hit-from>
<Hsp_hit-to>313</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>14</Hsp_identity>
<Hsp_positive>21</Hsp_positive>
<Hsp_gaps>1</Hsp_gaps>
<Hsp_align-len>34</Hsp_align-len>
<Hsp_qseq>RLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSN</Hsp_qseq>
<Hsp_hseq>KMAE-IENIEGNETLFYEKITCLYKEIMAYKTTN</Hsp_hseq>
<Hsp_midline>++AE IE IEGN E LY++ ++ KT+N</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>6</Hit_num>
<Hit_id>gi|16412165|emb|CAD00878.1|</Hit_id>
<Hit_def>lmo2665 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAD00878</Hit_accession>
<Hit_len>423</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>25.409</Hsp_bit-score>
<Hsp_score>54</Hsp_score>
<Hsp_evalue>1.43409</Hsp_evalue>
<Hsp_query-from>109</Hsp_query-from>
<Hsp_query-to>136</Hsp_query-to>
<Hsp_hit-from>289</Hsp_hit-from>
<Hsp_hit-to>316</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>8</Hsp_identity>
<Hsp_positive>18</Hsp_positive>
<Hsp_align-len>28</Hsp_align-len>
<Hsp_qseq>YTGRTVRAGMDALVDVGRPSSIQLAVLV</Hsp_qseq>
<Hsp_hseq>FKGRELYIGLDAALSIGHPANISTGLIL</Hsp_hseq>
<Hsp_midline>+ GR + G+DA + +G P++I +++</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>7</Hit_num>
<Hit_id>gi|16412220|emb|CAD00933.1|</Hit_id>
<Hit_def>lmo2720 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAD00933</Hit_accession>
<Hit_len>525</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>25.409</Hsp_bit-score>
<Hsp_score>54</Hsp_score>
<Hsp_evalue>1.49518</Hsp_evalue>
<Hsp_query-from>58</Hsp_query-from>
<Hsp_query-to>74</Hsp_query-to>
<Hsp_hit-from>355</Hsp_hit-from>
<Hsp_hit-to>372</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>12</Hsp_identity>
<Hsp_positive>14</Hsp_positive>
<Hsp_gaps>1</Hsp_gaps>
<Hsp_align-len>18</Hsp_align-len>
<Hsp_qseq>EGNPVTVGEI-DITLYRD</Hsp_qseq>
<Hsp_hseq>DGNPVGVGEIGDIAMRRD</Hsp_hseq>
<Hsp_midline>+GNPV VGEI DI + RD</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>8</Hit_num>
<Hit_id>gi|16411665|emb|CAD00273.1|</Hit_id>
<Hit_def>lmo2195 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAD00273</Hit_accession>
<Hit_len>309</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>25.0238</Hsp_bit-score>
<Hsp_score>53</Hsp_score>
<Hsp_evalue>2.07022</Hsp_evalue>
<Hsp_query-from>76</Hsp_query-from>
<Hsp_query-to>109</Hsp_query-to>
<Hsp_hit-from>262</Hsp_hit-from>
<Hsp_hit-to>295</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>13</Hsp_identity>
<Hsp_positive>19</Hsp_positive>
<Hsp_align-len>34</Hsp_align-len>
<Hsp_qseq>LSKKTSNDEPLVKGADIPVDITDQKVILVDDVLY</Hsp_qseq>
<Hsp_hseq>VSSIQTNDYPVIMGTTILFAVMLVFVILVVDILY</Hsp_hseq>
<Hsp_midline>+S +ND P++ G I + VILV D+LY</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>9</Hit_num>
<Hit_id>gi|16412026|emb|CAD00616.1|</Hit_id>
<Hit_def>upp [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAD00616</Hit_accession>
<Hit_len>209</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>24.6386</Hsp_bit-score>
<Hsp_score>52</Hsp_score>
<Hsp_evalue>2.21313</Hsp_evalue>
<Hsp_query-from>69</Hsp_query-from>
<Hsp_query-to>125</Hsp_query-to>
<Hsp_hit-from>100</Hsp_hit-from>
<Hsp_hit-to>151</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>17</Hsp_identity>
<Hsp_positive>27</Hsp_positive>
<Hsp_gaps>5</Hsp_gaps>
<Hsp_align-len>57</Hsp_align-len>
<Hsp_qseq>ITLYRDDLSKKTSNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVG</Hsp_qseq>
<Hsp_hseq>VGLYRDH-----DTLEPVEYFVKLPSDVEERLFIVVDPMLATGGSAIMAIDCLKKRG</Hsp_hseq>
<Hsp_midline>+ LYRD EP+ +P D+ ++ I+VD +L TG + +D L G</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>10</Hit_num>
<Hit_id>gi|16410953|emb|CAC99602.1|</Hit_id>
<Hit_def>apt [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99602</Hit_accession>
<Hit_len>173</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>24.6386</Hsp_bit-score>
<Hsp_score>52</Hsp_score>
<Hsp_evalue>2.25037</Hsp_evalue>
<Hsp_query-from>99</Hsp_query-from>
<Hsp_query-to>125</Hsp_query-to>
<Hsp_hit-from>115</Hsp_hit-from>
<Hsp_hit-to>141</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>10</Hsp_identity>
<Hsp_positive>19</Hsp_positive>
<Hsp_align-len>27</Hsp_align-len>
<Hsp_qseq>QKVILVDDVLYTGRTVRAGMDALVDVG</Hsp_qseq>
<Hsp_hseq>QRVLITDDLLATGGTIEATIKLVEELG</Hsp_hseq>
<Hsp_midline>Q+V++ DD+L TG T+ A + + ++G</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>11</Hit_num>
<Hit_id>gi|16410386|emb|CAC99062.1|</Hit_id>
<Hit_def>lmo0984 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99062</Hit_accession>
<Hit_len>151</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>24.2534</Hsp_bit-score>
<Hsp_score>51</Hsp_score>
<Hsp_evalue>2.91465</Hsp_evalue>
<Hsp_query-from>58</Hsp_query-from>
<Hsp_query-to>95</Hsp_query-to>
<Hsp_hit-from>7</Hsp_hit-from>
<Hsp_hit-to>40</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>12</Hsp_identity>
<Hsp_positive>22</Hsp_positive>
<Hsp_gaps>4</Hsp_gaps>
<Hsp_align-len>38</Hsp_align-len>
<Hsp_qseq>EGNPVTVGEIDITLYRDDLSKKTSNDEPLVKGADIPVD</Hsp_qseq>
<Hsp_hseq>QNNNLAVGEVDVYCHPDNLEEVTN----IVMGIDEPTE</Hsp_hseq>
<Hsp_midline>+ N + VGE+D+ + D+L + T+ +V G D P +</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>12</Hit_num>
<Hit_id>gi|16409884|emb|CAC98587.1|</Hit_id>
<Hit_def>lmo0508 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98587</Hit_accession>
<Hit_len>423</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>23.8682</Hsp_bit-score>
<Hsp_score>50</Hsp_score>
<Hsp_evalue>3.83855</Hsp_evalue>
<Hsp_query-from>109</Hsp_query-from>
<Hsp_query-to>136</Hsp_query-to>
<Hsp_hit-from>288</Hsp_hit-from>
<Hsp_hit-to>315</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>9</Hsp_identity>
<Hsp_positive>17</Hsp_positive>
<Hsp_align-len>28</Hsp_align-len>
<Hsp_qseq>YTGRTVRAGMDALVDVGRPSSIQLAVLV</Hsp_qseq>
<Hsp_hseq>FPGRELFIGLDSAVGIGHPFVLSLGLLM</Hsp_hseq>
<Hsp_midline>+ GR + G+D+ V +G P + L +L+</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>13</Hit_num>
<Hit_id>gi|16409885|emb|CAC98588.1|</Hit_id>
<Hit_def>prs [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98588</Hit_accession>
<Hit_len>311</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>23.8682</Hsp_bit-score>
<Hsp_score>50</Hsp_score>
<Hsp_evalue>4.1379</Hsp_evalue>
<Hsp_query-from>16</Hsp_query-from>
<Hsp_query-to>133</Hsp_query-to>
<Hsp_hit-from>148</Hsp_hit-from>
<Hsp_hit-to>247</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>28</Hsp_identity>
<Hsp_positive>51</Hsp_positive>
<Hsp_gaps>18</Hsp_gaps>
<Hsp_align-len>118</Hsp_align-len>
<Hsp_qseq>ALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLA</Hsp_qseq>
<Hsp_hseq>AIPLIGDYLIE-NYGEKDVVVVAPDHSGVVRARRIADRLNA----PIAI-----------LNRKPRPHEDEI--MSVIGDVKGKVAIVVDDIIDTGVRATTSADILLEKGAVEVIACA</Hsp_hseq>
<Hsp_midline>A+ I +IE N G + ++V G+ A+R+A+R+ P+ + L++K E + + D+ + I+VDD++ TG D L++ G I A</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>14</Hit_num>
<Hit_id>gi|16411021|emb|CAC99670.1|</Hit_id>
<Hit_def>lmo1592 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99670</Hit_accession>
<Hit_len>403</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>23.483</Hsp_bit-score>
<Hsp_score>49</Hsp_score>
<Hsp_evalue>5.97338</Hsp_evalue>
<Hsp_query-from>114</Hsp_query-from>
<Hsp_query-to>154</Hsp_query-to>
<Hsp_hit-from>88</Hsp_hit-from>
<Hsp_hit-to>128</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>13</Hsp_identity>
<Hsp_positive>19</Hsp_positive>
<Hsp_align-len>41</Hsp_align-len>
<Hsp_qseq>VRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNI</Hsp_qseq>
<Hsp_hseq>VKAAALALVQDAHEENGTFKVAARRSHREFPLDSNEINQEI</Hsp_hseq>
<Hsp_midline>V+A ALV + V R HRE P+ ++ I + I</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>15</Hit_num>
<Hit_id>gi|16409435|emb|CAC98291.1|</Hit_id>
<Hit_def>lmo0076 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98291</Hit_accession>
<Hit_len>350</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>22.7126</Hsp_bit-score>
<Hsp_score>47</Hsp_score>
<Hsp_evalue>8.62304</Hsp_evalue>
<Hsp_query-from>14</Hsp_query-from>
<Hsp_query-to>44</Hsp_query-to>
<Hsp_hit-from>5</Hsp_hit-from>
<Hsp_hit-to>35</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>9</Hsp_identity>
<Hsp_positive>16</Hsp_positive>
<Hsp_align-len>31</Hsp_align-len>
<Hsp_qseq>RRALTRIAHEMIERNKGMNNCILVGIKTRGI</Hsp_qseq>
<Hsp_hseq>QRDIDKYYDMLVEKNSNYEGVFFVGVKTTGI</Hsp_hseq>
<Hsp_midline>+R + + ++E+N VG+KT GI</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>16</Hit_num>
<Hit_id>gi|16410603|emb|CAC99265.1|</Hit_id>
<Hit_def>lmo1187 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99265</Hit_accession>
<Hit_len>147</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>22.7126</Hsp_bit-score>
<Hsp_score>47</Hsp_score>
<Hsp_evalue>9.06572</Hsp_evalue>
<Hsp_query-from>106</Hsp_query-from>
<Hsp_query-to>134</Hsp_query-to>
<Hsp_hit-from>102</Hsp_hit-from>
<Hsp_hit-to>130</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>11</Hsp_identity>
<Hsp_positive>18</Hsp_positive>
<Hsp_align-len>29</Hsp_align-len>
<Hsp_qseq>DVLYTGRTVRAGMDALVDVGRPSSIQLAV</Hsp_qseq>
<Hsp_hseq>DVVIDGRTVSAGPGEIIFIPKGSQIKFSV</Hsp_hseq>
<Hsp_midline>DV+ GRTV AG ++ + + S I+ +V</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
</Iteration_hits>
<Iteration_stat>
<Statistics>
<Statistics_db-num>2846</Statistics_db-num>
<Statistics_db-len>870878</Statistics_db-len>
<Statistics_hsp-len>75</Statistics_hsp-len>
<Statistics_eff-space>6.44279e+07</Statistics_eff-space>
<Statistics_kappa>0.041</Statistics_kappa>
<Statistics_lambda>0.267</Statistics_lambda>
<Statistics_entropy>0.14</Statistics_entropy>
</Statistics>
</Iteration_stat>
</Iteration>
<Iteration>
<Iteration_iter-num>2</Iteration_iter-num>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gi|16411294|emb|CAC99918.1|</Hit_id>
<Hit_def>pyrR [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99918</Hit_accession>
<Hit_len>183</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>260.954</Hsp_bit-score>
<Hsp_score>666</Hsp_score>
<Hsp_evalue>1.96714e-71</Hsp_evalue>
<Hsp_query-from>1</Hsp_query-from>
<Hsp_query-to>171</Hsp_query-to>
<Hsp_hit-from>1</Hsp_hit-from>
<Hsp_hit-to>172</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>117</Hsp_identity>
<Hsp_positive>140</Hsp_positive>
<Hsp_gaps>1</Hsp_gaps>
<Hsp_align-len>172</Hsp_align-len>
<Hsp_qseq>MNQKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLS-KKTSNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIPTSKSEKVMVQLDEVDQ</Hsp_qseq>
<Hsp_hseq>MQKQVVVMDEAAIKRALTRVSYEIIERNKGTKNLALVGIKTRGIYLAERLHKRILEIEGIDVPVGDIDITLYRDDLSFKDDKTREPAVHGTNIPFDINGKKVVLVDDVLYTGRTVRAAMDALMDVGRPAQIHLAVLADRGHRELPIRADYVGKNIPTSGNERVEVRLTDVDH</Hsp_hseq>
<Hsp_midline>M ++ V++DE AI+RALTR+++E+IERNKG N LVGIKTRGIYLA+RL +RI +IEG V VG+IDITLYRDDLS K EP V G +IP DI +KV+LVDDVLYTGRTVRA MDAL+DVGRP+ I LAVL DRGHRELPIRADY+GKNIPTS +E+V V+L +VD </Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>2</Hit_num>
<Hit_id>gi|16409584|emb|CAD00746.1|</Hit_id>
<Hit_def>fusion protein, N-terminal part similar to B. subtilis YacA protein, C-terminal part similar to hypoxanthine-guanine phosphoribosyltransferase [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAD00746</Hit_accession>
<Hit_len>648</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>196.241</Hsp_bit-score>
<Hsp_score>498</Hsp_score>
<Hsp_evalue>5.16352e-52</Hsp_evalue>
<Hsp_query-from>4</Hsp_query-from>
<Hsp_query-to>155</Hsp_query-to>
<Hsp_hit-from>475</Hsp_hit-from>
<Hsp_hit-to>617</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>32</Hsp_identity>
<Hsp_positive>78</Hsp_positive>
<Hsp_gaps>11</Hsp_gaps>
<Hsp_align-len>153</Hsp_align-len>
<Hsp_qseq>KAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDR-GHRELPIRADYIGKNIP</Hsp_qseq>
<Hsp_hseq>QKVLISEDELQEKIRELGRELTTEYEG-RNPLVVGVLKGATPFMTDLLKRVDTY----LEMDFMDVSSYGN--GTVSSGEVKIIK--DLNASVEGRDVLVIEDIIDSGRTLSYLVD-LIKYRKAKSVKLVTLLDKPAGRNVEIEADYVGFVVP</Hsp_hseq>
<Hsp_midline>+ V++ E ++ + + E+ +G N ++VG+ L +R++ + + +D++ Y + +S + ++K D+ + + V++++D++ +GRT+ +D L+ + S++L L+D+ R + I ADY+G +P</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>3</Hit_num>
<Hit_id>gi|16411285|emb|CAC99909.1|</Hit_id>
<Hit_def>pyrE [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99909</Hit_accession>
<Hit_len>209</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>30.2198</Hsp_bit-score>
<Hsp_score>67</Hsp_score>
<Hsp_evalue>0.0528281</Hsp_evalue>
<Hsp_query-from>33</Hsp_query-from>
<Hsp_query-to>125</Hsp_query-to>
<Hsp_hit-from>39</Hsp_hit-from>
<Hsp_hit-to>142</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>31</Hsp_identity>
<Hsp_positive>51</Hsp_positive>
<Hsp_gaps>33</Hsp_gaps>
<Hsp_align-len>115</Hsp_align-len>
<Hsp_qseq>NCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSN-----------DEPLV----------KGADIPVDIT-DQKVILVDDVLYTGRTVRAGMDALVDVG</Hsp_qseq>
<Hsp_hseq>NRLTLGFPKVRQFIAKSLAEKIKQ------TFGEIDVVA-----GTATAGIPHAAWVSDLLDLPMVYVRSKAKEHGKGNQIEGPISKGQKVVVIEDLISTGGSSLKAVEALEEAG</Hsp_hseq>
<Hsp_midline>N + +G ++AK LAE+I+Q T GEID+ T+ D P+V KG I I+ QKV++++D++ TG + ++AL + G</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>4</Hit_num>
<Hit_id>gi|16412026|emb|CAD00616.1|</Hit_id>
<Hit_def>upp [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAD00616</Hit_accession>
<Hit_len>209</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>29.0642</Hsp_bit-score>
<Hsp_score>64</Hsp_score>
<Hsp_evalue>0.115741</Hsp_evalue>
<Hsp_query-from>69</Hsp_query-from>
<Hsp_query-to>136</Hsp_query-to>
<Hsp_hit-from>100</Hsp_hit-from>
<Hsp_hit-to>161</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>19</Hsp_identity>
<Hsp_positive>32</Hsp_positive>
<Hsp_gaps>6</Hsp_gaps>
<Hsp_align-len>68</Hsp_align-len>
<Hsp_qseq>ITLYRDDLSKKTSNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLV</Hsp_qseq>
<Hsp_hseq>VGLYRDH-----DTLEPVEYFVKLPSDVEERLFIVVDPMLATGGSAIMAIDCLKKRG-ARNMKFMCLV</Hsp_hseq>
<Hsp_midline>+ LYRD EP+ +P D+ ++ I+VD +L TG + +D L G +++ LV</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>5</Hit_num>
<Hit_id>gi|16409885|emb|CAC98588.1|</Hit_id>
<Hit_def>prs [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98588</Hit_accession>
<Hit_len>311</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>29.0642</Hsp_bit-score>
<Hsp_score>64</Hsp_score>
<Hsp_evalue>0.126867</Hsp_evalue>
<Hsp_query-from>95</Hsp_query-from>
<Hsp_query-to>134</Hsp_query-to>
<Hsp_hit-from>209</Hsp_hit-from>
<Hsp_hit-to>248</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>12</Hsp_identity>
<Hsp_positive>19</Hsp_positive>
<Hsp_align-len>40</Hsp_align-len>
<Hsp_qseq>DITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAV</Hsp_qseq>
<Hsp_hseq>DVKGKVAIVVDDIIDTGVRATTSADILLEKGAVEVIACAT</Hsp_hseq>
<Hsp_midline>D+ + I+VDD++ TG D L++ G I A </Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>6</Hit_num>
<Hit_id>gi|16409989|emb|CAC98678.1|</Hit_id>
<Hit_def>lmo0600 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98678</Hit_accession>
<Hit_len>196</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>26.7531</Hsp_bit-score>
<Hsp_score>58</Hsp_score>
<Hsp_evalue>0.555562</Hsp_evalue>
<Hsp_query-from>123</Hsp_query-from>
<Hsp_query-to>149</Hsp_query-to>
<Hsp_hit-from>49</Hsp_hit-from>
<Hsp_hit-to>75</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>11</Hsp_identity>
<Hsp_positive>16</Hsp_positive>
<Hsp_align-len>27</Hsp_align-len>
<Hsp_qseq>DVGRPSSIQLAVLVDRGHRELPIRADY</Hsp_qseq>
<Hsp_hseq>DLGKPEEIAADIISERGIREEPTEMDY</Hsp_hseq>
<Hsp_midline>D+G+P I ++ +RG RE P DY</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>7</Hit_num>
<Hit_id>gi|16411222|emb|CAC99846.1|</Hit_id>
<Hit_def>glutamine phosphoribosylpyrophosphate amidotransferase [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99846</Hit_accession>
<Hit_len>475</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>26.3679</Hsp_bit-score>
<Hsp_score>57</Hsp_score>
<Hsp_evalue>0.678735</Hsp_evalue>
<Hsp_query-from>96</Hsp_query-from>
<Hsp_query-to>132</Hsp_query-to>
<Hsp_hit-from>346</Hsp_hit-from>
<Hsp_hit-to>381</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>7</Hsp_identity>
<Hsp_positive>20</Hsp_positive>
<Hsp_gaps>1</Hsp_gaps>
<Hsp_align-len>37</Hsp_align-len>
<Hsp_qseq>ITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQL</Hsp_qseq>
<Hsp_hseq>VEGKRVVMIDDSIVRGTTSKRIVQLLREAG-AAEVHV</Hsp_hseq>
<Hsp_midline>+ ++V+++DD + G T + + L + G + + +</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>8</Hit_num>
<Hit_id>gi|16409865|emb|CAC98568.1|</Hit_id>
<Hit_def>lmo0489 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98568</Hit_accession>
<Hit_len>664</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>25.5975</Hsp_bit-score>
<Hsp_score>55</Hsp_score>
<Hsp_evalue>1.22738</Hsp_evalue>
<Hsp_query-from>112</Hsp_query-from>
<Hsp_query-to>157</Hsp_query-to>
<Hsp_hit-from>612</Hsp_hit-from>
<Hsp_hit-to>657</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>11</Hsp_identity>
<Hsp_positive>19</Hsp_positive>
<Hsp_align-len>46</Hsp_align-len>
<Hsp_qseq>RTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIPTS</Hsp_qseq>
<Hsp_hseq>RPERPLMEELAAYGKEKQIEIVNIGDSAATRKILEGVREGRNILTT</Hsp_hseq>
<Hsp_midline>R R M+ L G+ I++ + D + G+NI T+</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>9</Hit_num>
<Hit_id>gi|16411665|emb|CAD00273.1|</Hit_id>
<Hit_def>lmo2195 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAD00273</Hit_accession>
<Hit_len>309</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>25.5975</Hsp_bit-score>
<Hsp_score>55</Hsp_score>
<Hsp_evalue>1.25849</Hsp_evalue>
<Hsp_query-from>76</Hsp_query-from>
<Hsp_query-to>109</Hsp_query-to>
<Hsp_hit-from>262</Hsp_hit-from>
<Hsp_hit-to>295</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>13</Hsp_identity>
<Hsp_positive>19</Hsp_positive>
<Hsp_align-len>34</Hsp_align-len>
<Hsp_qseq>LSKKTSNDEPLVKGADIPVDITDQKVILVDDVLY</Hsp_qseq>
<Hsp_hseq>VSSIQTNDYPVIMGTTILFAVMLVFVILVVDILY</Hsp_hseq>
<Hsp_midline>+S +ND P++ G I + VILV D+LY</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>10</Hit_num>
<Hit_id>gi|16409905|emb|CAC98608.1|</Hit_id>
<Hit_def>lmo0529 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98608</Hit_accession>
<Hit_len>416</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>24.8271</Hsp_bit-score>
<Hsp_score>53</Hsp_score>
<Hsp_evalue>2.18278</Hsp_evalue>
<Hsp_query-from>36</Hsp_query-from>
<Hsp_query-to>106</Hsp_query-to>
<Hsp_hit-from>23</Hsp_hit-from>
<Hsp_hit-to>88</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>16</Hsp_identity>
<Hsp_positive>31</Hsp_positive>
<Hsp_gaps>5</Hsp_gaps>
<Hsp_align-len>71</Hsp_align-len>
<Hsp_qseq>LVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSNDEPLVKGADIPVDITDQKVILVDD</Hsp_qseq>
<Hsp_hseq>IVLIVAGYVYYLKNEARKVPEI---PVEVPFVSVMVPAHNEGKVIVKTVESLLAFDYPVD--RYEIIVIND</Hsp_hseq>
<Hsp_midline>+V I +Y K A ++ +I PV V + + + + K + D PVD ++I+++D</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>11</Hit_num>
<Hit_id>gi|16410603|emb|CAC99265.1|</Hit_id>
<Hit_def>lmo1187 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99265</Hit_accession>
<Hit_len>147</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>24.4419</Hsp_bit-score>
<Hsp_score>52</Hsp_score>
<Hsp_evalue>3.07312</Hsp_evalue>
<Hsp_query-from>96</Hsp_query-from>
<Hsp_query-to>134</Hsp_query-to>
<Hsp_hit-from>97</Hsp_hit-from>
<Hsp_hit-to>130</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>11</Hsp_identity>
<Hsp_positive>21</Hsp_positive>
<Hsp_gaps>5</Hsp_gaps>
<Hsp_align-len>39</Hsp_align-len>
<Hsp_qseq>ITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAV</Hsp_qseq>
<Hsp_hseq>IEGRLDVVID-----GRTVSAGPGEIIFIPKGSQIKFSV</Hsp_hseq>
<Hsp_midline>I + +++D GRTV AG ++ + + S I+ +V</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>12</Hit_num>
<Hit_id>gi|16410224|emb|CAC98913.1|</Hit_id>
<Hit_def>putative peptidoglycan bound protein (LPXTG motif) [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98913</Hit_accession>
<Hit_len>334</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>24.4419</Hsp_bit-score>
<Hsp_score>52</Hsp_score>
<Hsp_evalue>3.17742</Hsp_evalue>
<Hsp_query-from>80</Hsp_query-from>
<Hsp_query-to>125</Hsp_query-to>
<Hsp_hit-from>66</Hsp_hit-from>
<Hsp_hit-to>104</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>14</Hsp_identity>
<Hsp_positive>19</Hsp_positive>
<Hsp_gaps>7</Hsp_gaps>
<Hsp_align-len>46</Hsp_align-len>
<Hsp_qseq>TSNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVG</Hsp_qseq>
<Hsp_hseq>TPKDIPGYKLREIPHNATG-------NITDTGIIVRYIYDKTIDVR</Hsp_hseq>
<Hsp_midline>T D P K +IP + T ++ TG VR D +DV </Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>13</Hit_num>
<Hit_id>gi|16412154|emb|CAD00867.1|</Hit_id>
<Hit_def>fus [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAD00867</Hit_accession>
<Hit_len>695</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>24.0567</Hsp_bit-score>
<Hsp_score>51</Hsp_score>
<Hsp_evalue>3.42521</Hsp_evalue>
<Hsp_query-from>110</Hsp_query-from>
<Hsp_query-to>148</Hsp_query-to>
<Hsp_hit-from>443</Hsp_hit-from>
<Hsp_hit-to>472</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>14</Hsp_identity>
<Hsp_positive>20</Hsp_positive>
<Hsp_gaps>9</Hsp_gaps>
<Hsp_align-len>39</Hsp_align-len>
<Hsp_qseq>TGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRAD</Hsp_qseq>
<Hsp_hseq>TGQTLISGMGEL---------HLDILVDRMRREFRVEAN</Hsp_hseq>
<Hsp_midline>TG+T+ +GM L L +LVDR RE + A+</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>14</Hit_num>
<Hit_id>gi|16409857|emb|CAC98560.1|</Hit_id>
<Hit_def>lmo0481 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98560</Hit_accession>
<Hit_len>566</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>24.0567</Hsp_bit-score>
<Hsp_score>51</Hsp_score>
<Hsp_evalue>3.84962</Hsp_evalue>
<Hsp_query-from>8</Hsp_query-from>
<Hsp_query-to>68</Hsp_query-to>
<Hsp_hit-from>25</Hsp_hit-from>
<Hsp_hit-to>92</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>14</Hsp_identity>
<Hsp_positive>21</Hsp_positive>
<Hsp_gaps>7</Hsp_gaps>
<Hsp_align-len>68</Hsp_align-len>
<Hsp_qseq>LDEQAIRRALTRIAHEMIERNKGMNNCILVG----IKTRGIYLAKRLA---ERIEQIEGNPVTVGEID</Hsp_qseq>
<Hsp_hseq>ISEQKAAEKERAVDEAIKARYYGDKQVYFVGGGIASLAGAVYLIRDANFDGKNIHIIEGMHILGGSND</Hsp_hseq>
<Hsp_midline>+ EQ + + R G VG +YL + + I IEG + G D</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>15</Hit_num>
<Hit_id>gi|16411180|emb|CAC99804.1|</Hit_id>
<Hit_def>lmo1726 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99804</Hit_accession>
<Hit_len>327</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>23.6715</Hsp_bit-score>
<Hsp_score>50</Hsp_score>
<Hsp_evalue>4.74252</Hsp_evalue>
<Hsp_query-from>36</Hsp_query-from>
<Hsp_query-to>108</Hsp_query-to>
<Hsp_hit-from>190</Hsp_hit-from>
<Hsp_hit-to>251</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>15</Hsp_identity>
<Hsp_positive>29</Hsp_positive>
<Hsp_gaps>19</Hsp_gaps>
<Hsp_align-len>77</Hsp_align-len>
<Hsp_qseq>LVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSNDEPLVKGAD----IPVDITDQKVILVDDVL</Hsp_qseq>
<Hsp_hseq>LFGEPVKATYFATKLPTGVDGLGPIILEYPTFNIT---------------IIQGKNSQSFLPSEIYGQKGTLIVDPL</Hsp_hseq>
<Hsp_midline>L G + Y A +L ++ + + +IT +++G + +P +I QK L+ D L</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>16</Hit_num>
<Hit_id>gi|16411460|emb|CAD00085.1|</Hit_id>
<Hit_def>lmo2007 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAD00085</Hit_accession>
<Hit_len>485</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>22.9011</Hsp_bit-score>
<Hsp_score>48</Hsp_score>
<Hsp_evalue>7.56717</Hsp_evalue>
<Hsp_query-from>47</Hsp_query-from>
<Hsp_query-to>114</Hsp_query-to>
<Hsp_hit-from>51</Hsp_hit-from>
<Hsp_hit-to>137</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>19</Hsp_identity>
<Hsp_positive>35</Hsp_positive>
<Hsp_gaps>19</Hsp_gaps>
<Hsp_align-len>87</Hsp_align-len>
<Hsp_qseq>AKRLAERIEQIEGNPVTVGEIDITLYRDDLSKK-TSNDEPLV-------------KGADIP----VDITDQKVIL-VDDVLYTGRTV</Hsp_qseq>
<Hsp_hseq>MKEVNKYTEEKIGVKVEMTQIDWGDYGKRMQTVINSGENFDIAYSAAGEFVSYSQKGAFLPLNKYLDKEGKKMKAELNDVLWEGATI</Hsp_hseq>
<Hsp_midline> K + + E+ G V + +ID Y + S + + KGA +P +D +K+ ++DVL+ G T+</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
</Iteration_hits>
<Iteration_stat>
<Statistics>
<Statistics_db-num>2846</Statistics_db-num>
<Statistics_db-len>870878</Statistics_db-len>
<Statistics_hsp-len>75</Statistics_hsp-len>
<Statistics_eff-space>6.44279e+07</Statistics_eff-space>
<Statistics_kappa>0.0475563</Statistics_kappa>
<Statistics_lambda>0.267</Statistics_lambda>
<Statistics_entropy>0.14</Statistics_entropy>
</Statistics>
</Iteration_stat>
<Iteration_message>CONVERGED</Iteration_message>
</Iteration>
</BlastOutput_iterations>
</BlastOutput>
<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
<BlastOutput>
<BlastOutput_program>blastp</BlastOutput_program>
<BlastOutput_version>blastp 2.2.16 [Mar-25-2007]</BlastOutput_version>
<BlastOutput_reference>~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
<BlastOutput_db>AL591824.faa</BlastOutput_db>
<BlastOutput_query-ID>lcl|QUERY</BlastOutput_query-ID>
<BlastOutput_query-def>gi|154350371|gb|ABS72450.1| DnaN [Bacillus amyloliquefaciens FZB42]</BlastOutput_query-def>
<BlastOutput_query-len>378</BlastOutput_query-len>
<BlastOutput_param>
<Parameters>
<Parameters_matrix>BLOSUM62</Parameters_matrix>
<Parameters_expect>10</Parameters_expect>
<Parameters_include>0.002</Parameters_include>
<Parameters_gap-open>11</Parameters_gap-open>
<Parameters_gap-extend>1</Parameters_gap-extend>
<Parameters_filter>F</Parameters_filter>
</Parameters>
</BlastOutput_param>
<BlastOutput_iterations>
<Iteration>
<Iteration_iter-num>1</Iteration_iter-num>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gi|16409361|emb|CAC98217.1|</Hit_id>
<Hit_def>DNA polymerase III, beta chain [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98217</Hit_accession>
<Hit_len>381</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>420.239</Hsp_bit-score>
<Hsp_score>1079</Hsp_score>
<Hsp_evalue>5.57178e-119</Hsp_evalue>
<Hsp_query-from>1</Hsp_query-from>
<Hsp_query-to>378</Hsp_query-to>
<Hsp_hit-from>1</Hsp_hit-from>
<Hsp_hit-to>381</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>221</Hsp_identity>
<Hsp_positive>293</Hsp_positive>
<Hsp_gaps>3</Hsp_gaps>
<Hsp_align-len>381</Hsp_align-len>
<Hsp_qseq>MKFTIQKDRLVESVQDVLKAVSSRTTIPILTGIKIVASDEGVSFTGSDSDISIESFIPKEDDDKEIVTIDQPGSIVLQARFFSEIVKKLPMATVEIEVQNQYLTIIRSGKAEFNLNGLDADEYPHLPQIEEHHAIQIPTDLLKNLIRQTVFAVSASETRPILTGVNWKVENGELLCTATDSHRLALRKAKLDIPEDSSYNVVIPGKSLTELSKILDDNQELVDIVITETQVLFKAKNVLFFSRLLDGNYPDTTSLIPQESKTEIVVNTKEFLQAIDRASLLAREGRNNVVKLSAKPADSLEISSNSPEIGKVVEAVLADQIDGEELNISFSPKYMMDALKVLEGADIRISFTGAMRPFLIR---TPNDETIVQLILPVRTY</Hsp_qseq>
<Hsp_hseq>MKFVIERDRLVQAVNEVTRAISARTTIPILTGIKIVVNDEGVTLTGSDSDISIEAFIPLIENDEVIVEVESFGGIVLQSKYFGDIVRRLPEENVEIEVTSNYQTNISSGQASFTLNGLDPMEYPKLPEVTDGKTIKIPINVLKNIVRQTVFAVSAIEVRPVLTGVNWIIKENKLSAVATDSHRLALREIPLETDIDEEYNIVIPGKSLSELNKLLDDASESIEMTLANNQILFKLKDLLFYSRLLEGSYPDTSRLIPTDTKSELVINSKAFLQAIDRASLLARENRNNVIKLMTLENGQVEVSSNSPEVGNVSENVFSQSFTGEEIKISFNGKYMMDALRAFEGDDIQISFSGTMRPFVLRPKDAANPNEILQLITPVRTY</Hsp_hseq>
<Hsp_midline>MKF I++DRLV++V +V +A+S+RTTIPILTGIKIV +DEGV+ TGSDSDISIE+FIP ++D+ IV ++ G IVLQ+++F +IV++LP VEIEV + Y T I SG+A F LNGLD EYP LP++ + I+IP ++LKN++RQTVFAVSA E RP+LTGVNW ++ +L ATDSHRLALR+ L+ D YN+VIPGKSL+EL+K+LDD E +++ + Q+LFK K++LF+SRLL+G+YPDT+ LIP ++K+E+V+N+K FLQAIDRASLLARE RNNV+KL +E+SSNSPE+G V E V + GEE+ ISF+ KYMMDAL+ EG DI+ISF+G MRPF++R N I+QLI PVRTY</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>2</Hit_num>
<Hit_id>gi|16409959|emb|CAC98662.1|</Hit_id>
<Hit_def>lmo0583 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98662</Hit_accession>
<Hit_len>776</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>32.7278</Hsp_bit-score>
<Hsp_score>73</Hsp_score>
<Hsp_evalue>0.0242028</Hsp_evalue>
<Hsp_query-from>63</Hsp_query-from>
<Hsp_query-to>181</Hsp_query-to>
<Hsp_hit-from>304</Hsp_hit-from>
<Hsp_hit-to>432</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>31</Hsp_identity>
<Hsp_positive>52</Hsp_positive>
<Hsp_gaps>10</Hsp_gaps>
<Hsp_align-len>129</Hsp_align-len>
<Hsp_qseq>DKEIVTIDQPGSIVLQARFFSEIVKKLPMATVEIEVQNQYLTI--------IRSGKAEFNLNGLDADEYPHLPQIEEHHAIQIPTDLLKNL--IRQTVFAVSASETRPILTGVNWKVENGELLCTATDS</Hsp_qseq>
<Hsp_hseq>DDEVLIIDPHTGRALPGRRFNDGLHQAIEAKEGVEVKEESRTLATITIQNYFRMYKKISGMTGTAKTEEEEFRQIYNMDVVVIPTNLRVNREDMQDDIFYTKKEKGRAIVYEVSWRYEKGQPTLIGTSS</Hsp_hseq>
<Hsp_midline>D E++ ID L R F++ + + A +EV+ + T+ R K + G E QI + IPT+L N ++ +F + R I+ V+W+ E G+ T S</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>3</Hit_num>
<Hit_id>gi|16410942|emb|CAC99591.1|</Hit_id>
<Hit_def>lmo1513 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99591</Hit_accession>
<Hit_len>382</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>28.8758</Hsp_bit-score>
<Hsp_score>63</Hsp_score>
<Hsp_evalue>0.340848</Hsp_evalue>
<Hsp_query-from>96</Hsp_query-from>
<Hsp_query-to>126</Hsp_query-to>
<Hsp_hit-from>266</Hsp_hit-from>
<Hsp_hit-to>296</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>12</Hsp_identity>
<Hsp_positive>19</Hsp_positive>
<Hsp_align-len>31</Hsp_align-len>
<Hsp_qseq>IEVQNQYLTIIRSGKAEFNLNGLDADEYPHL</Hsp_qseq>
<Hsp_hseq>ISFKKRMAEIWRSAELDFEVNGLEADTLPHV</Hsp_hseq>
<Hsp_midline>I + + I RS + +F +NGL+AD PH+</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>4</Hit_num>
<Hit_id>gi|16409922|emb|CAC98625.1|</Hit_id>
<Hit_def>lmo0546 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98625</Hit_accession>
<Hit_len>416</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>28.4906</Hsp_bit-score>
<Hsp_score>62</Hsp_score>
<Hsp_evalue>0.513003</Hsp_evalue>
<Hsp_query-from>270</Hsp_query-from>
<Hsp_query-to>319</Hsp_query-to>
<Hsp_hit-from>155</Hsp_hit-from>
<Hsp_hit-to>203</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>15</Hsp_identity>
<Hsp_positive>29</Hsp_positive>
<Hsp_gaps>1</Hsp_gaps>
<Hsp_align-len>50</Hsp_align-len>
<Hsp_qseq>EFLQAIDRASLLAREGRNNVVKLSAKPADSLEISSNSPEIGKVVEAVLAD</Hsp_qseq>
<Hsp_hseq>EFSKSMGMEVLVAGKGKNNKLKISANP-DSCQVEADGKNMASHMLAAFQD</Hsp_hseq>
<Hsp_midline>EF +++ L+A +G+NN +K+SA P DS ++ ++ + + A D</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>5</Hit_num>
<Hit_id>gi|16411998|emb|CAD00588.1|</Hit_id>
<Hit_def>translocase binding subunit (ATPase) [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAD00588</Hit_accession>
<Hit_len>837</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>26.5646</Hsp_bit-score>
<Hsp_score>57</Hsp_score>
<Hsp_evalue>1.85422</Hsp_evalue>
<Hsp_query-from>63</Hsp_query-from>
<Hsp_query-to>140</Hsp_query-to>
<Hsp_hit-from>310</Hsp_hit-from>
<Hsp_hit-to>395</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>21</Hsp_identity>
<Hsp_positive>36</Hsp_positive>
<Hsp_gaps>8</Hsp_gaps>
<Hsp_align-len>86</Hsp_align-len>
<Hsp_qseq>DKEIVTIDQPGSIVLQARFFSEIVKKLPMATVEIEVQNQYLTI--------IRSGKAEFNLNGLDADEYPHLPQIEEHHAIQIPTD</Hsp_qseq>
<Hsp_hseq>DDEVLIVDQFTGRIMKGRRFSEGLHQALEAKEGVTIQNESKTMATITFQNYFRMYKKLAGMTGTAKTEEEEFRDIYNMRVIEIPTN</Hsp_hseq>
<Hsp_midline>D E++ +DQ +++ R FSE + + A + +QN+ T+ R K + G E I I+IPT+</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>6</Hit_num>
<Hit_id>gi|16411204|emb|CAC99828.1|</Hit_id>
<Hit_def>lmo1750 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99828</Hit_accession>
<Hit_len>184</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>26.5646</Hsp_bit-score>
<Hsp_score>57</Hsp_score>
<Hsp_evalue>2.11904</Hsp_evalue>
<Hsp_query-from>308</Hsp_query-from>
<Hsp_query-to>340</Hsp_query-to>
<Hsp_hit-from>49</Hsp_hit-from>
<Hsp_hit-to>80</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>13</Hsp_identity>
<Hsp_positive>22</Hsp_positive>
<Hsp_gaps>1</Hsp_gaps>
<Hsp_align-len>33</Hsp_align-len>
<Hsp_qseq>EIGKVVEAVLADQIDGEELNISFSPKYMMDALK</Hsp_qseq>
<Hsp_hseq>EVLRRLEEYFSDKSD-QGLNLSSFPKYMMETVK</Hsp_hseq>
<Hsp_midline>E+ + +E +D+ D + LN+S PKYMM+ +K</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>7</Hit_num>
<Hit_id>gi|16410207|emb|CAC98896.1|</Hit_id>
<Hit_def>lmo0818 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98896</Hit_accession>
<Hit_len>876</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>25.7942</Hsp_bit-score>
<Hsp_score>55</Hsp_score>
<Hsp_evalue>2.98338</Hsp_evalue>
<Hsp_query-from>106</Hsp_query-from>
<Hsp_query-to>167</Hsp_query-to>
<Hsp_hit-from>28</Hsp_hit-from>
<Hsp_hit-to>82</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>18</Hsp_identity>
<Hsp_positive>27</Hsp_positive>
<Hsp_gaps>7</Hsp_gaps>
<Hsp_align-len>62</Hsp_align-len>
<Hsp_qseq>IRSGKAEFNLNGLDADEYPHLPQIEEHHAIQIPTDLLKNLIRQTVFAVSASETRPILTGVNW</Hsp_qseq>
<Hsp_hseq>VKQKHAEFGTNEFEEGKKESLLQKIGHHLVEITTIVL-------LFAAAISAYLAITTGYGW</Hsp_hseq>
<Hsp_midline>++ AEF N + + L Q HH ++I T +L +FA + S I TG W</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>8</Hit_num>
<Hit_id>gi|16411261|emb|CAC99885.1|</Hit_id>
<Hit_def>fabG [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99885</Hit_accession>
<Hit_len>247</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>25.7942</Hsp_bit-score>
<Hsp_score>55</Hsp_score>
<Hsp_evalue>3.27016</Hsp_evalue>
<Hsp_query-from>276</Hsp_query-from>
<Hsp_query-to>366</Hsp_query-to>
<Hsp_hit-from>20</Hsp_hit-from>
<Hsp_hit-to>106</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>26</Hsp_identity>
<Hsp_positive>40</Hsp_positive>
<Hsp_gaps>6</Hsp_gaps>
<Hsp_align-len>92</Hsp_align-len>
<Hsp_qseq>DRASLLAREGRNNVVKLSAKPADSLEISSNSPEIGKVVEAVLADQIDGEELNISFSPKYMMDALKVLEGADIRISFTGAMRP-FLIRTPNDE</Hsp_qseq>
<Hsp_hseq>DIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVEAMKANVAIAEDVDAFFK-----QAIERFGRVDILVNNAGITRDNLLMRMKEDE</Hsp_hseq>
<Hsp_midline>D A LA+EG N + P + E + E G VEA+ A+ E+++ F A++ DI ++ G R L+R DE</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>9</Hit_num>
<Hit_id>gi|16410081|emb|CAC98770.1|</Hit_id>
<Hit_def>two-component sensor histidine kinase CheA [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98770</Hit_accession>
<Hit_len>618</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>25.7942</Hsp_bit-score>
<Hsp_score>55</Hsp_score>
<Hsp_evalue>3.61454</Hsp_evalue>
<Hsp_query-from>267</Hsp_query-from>
<Hsp_query-to>322</Hsp_query-to>
<Hsp_hit-from>275</Hsp_hit-from>
<Hsp_hit-to>328</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>14</Hsp_identity>
<Hsp_positive>31</Hsp_positive>
<Hsp_gaps>2</Hsp_gaps>
<Hsp_align-len>56</Hsp_align-len>
<Hsp_qseq>NTKEFLQAIDRASLLAREGRNNVVKLSAKPADSLEISSNSPEIGKVVEAVLADQID</Hsp_qseq>
<Hsp_hseq>NNKELMEHLGRFSSISKEIQNGLLNMRMVPVDS--VFNRFPKMVRTLAKELGKKID</Hsp_hseq>
<Hsp_midline>N KE ++ + R S +++E +N ++ + P DS + + P++ + + L +ID</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>10</Hit_num>
<Hit_id>gi|16410572|emb|CAC99234.1|</Hit_id>
<Hit_def>lmo1156 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99234</Hit_accession>
<Hit_len>606</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>25.409</Hsp_bit-score>
<Hsp_score>54</Hsp_score>
<Hsp_evalue>4.41591</Hsp_evalue>
<Hsp_query-from>65</Hsp_query-from>
<Hsp_query-to>95</Hsp_query-to>
<Hsp_hit-from>440</Hsp_hit-from>
<Hsp_hit-to>470</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>12</Hsp_identity>
<Hsp_positive>20</Hsp_positive>
<Hsp_align-len>31</Hsp_align-len>
<Hsp_qseq>EIVTIDQPGSIVLQARFFSEIVKKLPMATVE</Hsp_qseq>
<Hsp_hseq>DMVTMIIQSEIGLEDRYLAEDIKKYPLAKVE</Hsp_hseq>
<Hsp_midline>++VT+ I L+ R+ +E +KK P+A VE</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>11</Hit_num>
<Hit_id>gi|16411268|emb|CAC99892.1|</Hit_id>
<Hit_def>lmo1814 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99892</Hit_accession>
<Hit_len>552</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>24.2534</Hsp_bit-score>
<Hsp_score>51</Hsp_score>
<Hsp_evalue>9.43565</Hsp_evalue>
<Hsp_query-from>211</Hsp_query-from>
<Hsp_query-to>238</Hsp_query-to>
<Hsp_hit-from>495</Hsp_hit-from>
<Hsp_hit-to>522</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>11</Hsp_identity>
<Hsp_positive>18</Hsp_positive>
<Hsp_align-len>28</Hsp_align-len>
<Hsp_qseq>LSKILDDNQELVDIVITETQVLFKAKNV</Hsp_qseq>
<Hsp_hseq>LEKLLDDDSEIVTIIVGEDSDTTKAETL</Hsp_hseq>
<Hsp_midline>L K+LDD+ E+V I++ E KA+ +</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
</Iteration_hits>
<Iteration_stat>
<Statistics>
<Statistics_db-num>2846</Statistics_db-num>
<Statistics_db-len>870878</Statistics_db-len>
<Statistics_hsp-len>82</Statistics_hsp-len>
<Statistics_eff-space>1.88702e+08</Statistics_eff-space>
<Statistics_kappa>0.041</Statistics_kappa>
<Statistics_lambda>0.267</Statistics_lambda>
<Statistics_entropy>0.14</Statistics_entropy>
</Statistics>
</Iteration_stat>
</Iteration>
<Iteration>
<Iteration_iter-num>2</Iteration_iter-num>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gi|16409361|emb|CAC98217.1|</Hit_id>
<Hit_def>DNA polymerase III, beta chain [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98217</Hit_accession>
<Hit_len>381</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>700.95</Hsp_bit-score>
<Hsp_score>1808</Hsp_score>
<Hsp_evalue>0</Hsp_evalue>
<Hsp_query-from>1</Hsp_query-from>
<Hsp_query-to>378</Hsp_query-to>
<Hsp_hit-from>1</Hsp_hit-from>
<Hsp_hit-to>381</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>221</Hsp_identity>
<Hsp_positive>293</Hsp_positive>
<Hsp_gaps>3</Hsp_gaps>
<Hsp_align-len>381</Hsp_align-len>
<Hsp_qseq>MKFTIQKDRLVESVQDVLKAVSSRTTIPILTGIKIVASDEGVSFTGSDSDISIESFIPKEDDDKEIVTIDQPGSIVLQARFFSEIVKKLPMATVEIEVQNQYLTIIRSGKAEFNLNGLDADEYPHLPQIEEHHAIQIPTDLLKNLIRQTVFAVSASETRPILTGVNWKVENGELLCTATDSHRLALRKAKLDIPEDSSYNVVIPGKSLTELSKILDDNQELVDIVITETQVLFKAKNVLFFSRLLDGNYPDTTSLIPQESKTEIVVNTKEFLQAIDRASLLAREGRNNVVKLSAKPADSLEISSNSPEIGKVVEAVLADQIDGEELNISFSPKYMMDALKVLEGADIRISFTGAMRPFLIR---TPNDETIVQLILPVRTY</Hsp_qseq>
<Hsp_hseq>MKFVIERDRLVQAVNEVTRAISARTTIPILTGIKIVVNDEGVTLTGSDSDISIEAFIPLIENDEVIVEVESFGGIVLQSKYFGDIVRRLPEENVEIEVTSNYQTNISSGQASFTLNGLDPMEYPKLPEVTDGKTIKIPINVLKNIVRQTVFAVSAIEVRPVLTGVNWIIKENKLSAVATDSHRLALREIPLETDIDEEYNIVIPGKSLSELNKLLDDASESIEMTLANNQILFKLKDLLFYSRLLEGSYPDTSRLIPTDTKSELVINSKAFLQAIDRASLLARENRNNVIKLMTLENGQVEVSSNSPEVGNVSENVFSQSFTGEEIKISFNGKYMMDALRAFEGDDIQISFSGTMRPFVLRPKDAANPNEILQLITPVRTY</Hsp_hseq>
<Hsp_midline>MKF I++DRLV++V +V +A+S+RTTIPILTGIKIV +DEGV+ TGSDSDISIE+FIP ++D+ IV ++ G IVLQ+++F +IV++LP VEIEV + Y T I SG+A F LNGLD EYP LP++ + I+IP ++LKN++RQTVFAVSA E RP+LTGVNW ++ +L ATDSHRLALR+ L+ D YN+VIPGKSL+EL+K+LDD E +++ + Q+LFK K++LF+SRLL+G+YPDT+ LIP ++K+E+V+N+K FLQAIDRASLLARE RNNV+KL +E+SSNSPE+G V E V + GEE+ ISF+ KYMMDAL+ EG DI+ISF+G MRPF++R N I+QLI PVRTY</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>2</Hit_num>
<Hit_id>gi|16409959|emb|CAC98662.1|</Hit_id>
<Hit_def>lmo0583 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98662</Hit_accession>
<Hit_len>776</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>34.9402</Hsp_bit-score>
<Hsp_score>79</Hsp_score>
<Hsp_evalue>0.00513589</Hsp_evalue>
<Hsp_query-from>63</Hsp_query-from>
<Hsp_query-to>181</Hsp_query-to>
<Hsp_hit-from>304</Hsp_hit-from>
<Hsp_hit-to>432</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>31</Hsp_identity>
<Hsp_positive>52</Hsp_positive>
<Hsp_gaps>10</Hsp_gaps>
<Hsp_align-len>129</Hsp_align-len>
<Hsp_qseq>DKEIVTIDQPGSIVLQARFFSEIVKKLPMATVEIEVQNQYLTI--------IRSGKAEFNLNGLDADEYPHLPQIEEHHAIQIPTDLLKNL--IRQTVFAVSASETRPILTGVNWKVENGELLCTATDS</Hsp_qseq>
<Hsp_hseq>DDEVLIIDPHTGRALPGRRFNDGLHQAIEAKEGVEVKEESRTLATITIQNYFRMYKKISGMTGTAKTEEEEFRQIYNMDVVVIPTNLRVNREDMQDDIFYTKKEKGRAIVYEVSWRYEKGQPTLIGTSS</Hsp_hseq>
<Hsp_midline>D E++ ID L R F++ + + A +EV+ + T+ R K + G E QI + IPT+L N ++ +F + R I+ V+W+ E G+ T S</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>3</Hit_num>
<Hit_id>gi|16411998|emb|CAD00588.1|</Hit_id>
<Hit_def>translocase binding subunit (ATPase) [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAD00588</Hit_accession>
<Hit_len>837</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>34.555</Hsp_bit-score>
<Hsp_score>78</Hsp_score>
<Hsp_evalue>0.00819482</Hsp_evalue>
<Hsp_query-from>60</Hsp_query-from>
<Hsp_query-to>147</Hsp_query-to>
<Hsp_hit-from>308</Hsp_hit-from>
<Hsp_hit-to>400</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>23</Hsp_identity>
<Hsp_positive>40</Hsp_positive>
<Hsp_gaps>11</Hsp_gaps>
<Hsp_align-len>96</Hsp_align-len>
<Hsp_qseq>EDDDKEIVTIDQPGSIVLQARFFSEIVKKLPMATVEIEVQNQ--------YLTIIRSGKAEFNLNGLDADEYPHLPQIEEHHAIQIPTDLLKNLIR</Hsp_qseq>
<Hsp_hseq>VQDDEVLI-VDQFTGRIMKGRRFSEGLHQALEAKEGVTIQNESKTMATITFQNYFRMYKKLAGMTGTAKTEEEEFRDIYNMRVIEIPTN--KVIIR</Hsp_hseq>
<Hsp_midline> DD+ ++ +DQ +++ R FSE + + A + +QN+ + R K + G E I I+IPT+ K +IR</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>4</Hit_num>
<Hit_id>gi|16410192|emb|CAC98881.1|</Hit_id>
<Hit_def>lmo0803 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98881</Hit_accession>
<Hit_len>682</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>27.2362</Hsp_bit-score>
<Hsp_score>59</Hsp_score>
<Hsp_evalue>1.14482</Hsp_evalue>
<Hsp_query-from>53</Hsp_query-from>
<Hsp_query-to>129</Hsp_query-to>
<Hsp_hit-from>406</Hsp_hit-from>
<Hsp_hit-to>490</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>20</Hsp_identity>
<Hsp_positive>34</Hsp_positive>
<Hsp_gaps>8</Hsp_gaps>
<Hsp_align-len>85</Hsp_align-len>
<Hsp_qseq>IESFI-PKEDDDKEIVTIDQPGSIVLQARFFSEIVKKLPMATV------EIEVQNQYLTIIRSGKAEFNLN-GLDADEYPHLPQI</Hsp_qseq>
<Hsp_hseq>IATFILPLLAKSEEVTTEDERAEIATRIRILRNVIRELKEQTLPETKAATDEVIEDYRKRIYDLQQNNSSNRGMDERERAKRLEI</Hsp_hseq>
<Hsp_midline>I +FI P +E+ T D+ I + R ++++L T+ EV Y I + + N G+D E +I</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>5</Hit_num>
<Hit_id>gi|16411204|emb|CAC99828.1|</Hit_id>
<Hit_def>lmo1750 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99828</Hit_accession>
<Hit_len>184</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>27.2362</Hsp_bit-score>
<Hsp_score>59</Hsp_score>
<Hsp_evalue>1.15441</Hsp_evalue>
<Hsp_query-from>308</Hsp_query-from>
<Hsp_query-to>340</Hsp_query-to>
<Hsp_hit-from>49</Hsp_hit-from>
<Hsp_hit-to>80</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>13</Hsp_identity>
<Hsp_positive>22</Hsp_positive>
<Hsp_gaps>1</Hsp_gaps>
<Hsp_align-len>33</Hsp_align-len>
<Hsp_qseq>EIGKVVEAVLADQIDGEELNISFSPKYMMDALK</Hsp_qseq>
<Hsp_hseq>EVLRRLEEYFSDKSD-QGLNLSSFPKYMMETVK</Hsp_hseq>
<Hsp_midline>E+ + +E +D+ D + LN+S PKYMM+ +K</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>6</Hit_num>
<Hit_id>gi|16410635|emb|CAC99297.1|</Hit_id>
<Hit_def>lmo1219 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99297</Hit_accession>
<Hit_len>119</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>27.2362</Hsp_bit-score>
<Hsp_score>59</Hsp_score>
<Hsp_evalue>1.18367</Hsp_evalue>
<Hsp_query-from>150</Hsp_query-from>
<Hsp_query-to>196</Hsp_query-to>
<Hsp_hit-from>72</Hsp_hit-from>
<Hsp_hit-to>118</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>10</Hsp_identity>
<Hsp_positive>21</Hsp_positive>
<Hsp_align-len>47</Hsp_align-len>
<Hsp_qseq>VFAVSASETRPILTGVNWKVENGELLCTATDSHRLALRKAKLDIPED</Hsp_qseq>
<Hsp_hseq>VTIISTGSSNGFFTGIDWGAAFDYMHSVVADLKRVAIREVAIEKQEE</Hsp_hseq>
<Hsp_midline>V +S + TG++W + D R+A+R+ ++ E+</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>7</Hit_num>
<Hit_id>gi|16409423|emb|CAC98279.1|</Hit_id>
<Hit_def>lmo0064 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98279</Hit_accession>
<Hit_len>233</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>26.851</Hsp_bit-score>
<Hsp_score>58</Hsp_score>
<Hsp_evalue>1.37549</Hsp_evalue>
<Hsp_query-from>314</Hsp_query-from>
<Hsp_query-to>378</Hsp_query-to>
<Hsp_hit-from>40</Hsp_hit-from>
<Hsp_hit-to>112</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>16</Hsp_identity>
<Hsp_positive>30</Hsp_positive>
<Hsp_gaps>8</Hsp_gaps>
<Hsp_align-len>73</Hsp_align-len>
<Hsp_qseq>EAVLADQID--------GEELNISFSPKYMMDALKVLEGADIRISFTGAMRPFLIRTPNDETIVQLILPVRTY</Hsp_qseq>
<Hsp_hseq>EDVFAEGFDRLKSKGILNEAGELTDGGGFLIDSLIEYYQSKKYVRMNQLMFAFLEKTPNELLVMIEITPQKEY</Hsp_hseq>
<Hsp_midline>E V A+ D E ++ +++D+L + + M FL +TPN+ ++ I P + Y</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>8</Hit_num>
<Hit_id>gi|16410481|emb|CAC99157.1|</Hit_id>
<Hit_def>lmo1079 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99157</Hit_accession>
<Hit_len>952</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>26.851</Hsp_bit-score>
<Hsp_score>58</Hsp_score>
<Hsp_evalue>1.45822</Hsp_evalue>
<Hsp_query-from>170</Hsp_query-from>
<Hsp_query-to>237</Hsp_query-to>
<Hsp_hit-from>646</Hsp_hit-from>
<Hsp_hit-to>710</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>18</Hsp_identity>
<Hsp_positive>32</Hsp_positive>
<Hsp_gaps>11</Hsp_gaps>
<Hsp_align-len>72</Hsp_align-len>
<Hsp_qseq>ENGELLCTAT-DSHRLALRKAKLDIPEDSSYNVVIP---GKSLTELSKILDDNQELVDIVITETQVLFKAKN</Hsp_qseq>
<Hsp_hseq>KEEALSYNAIIDNKDTSKREYKSNIKE-LEFETSIPKVNGKAPAKLTK------DKIEVSNAENSIQFKLKN</Hsp_hseq>
<Hsp_midline>+ L A D+ + R+ K +I E + IP GK+ +L+K + +++ E + FK KN</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>9</Hit_num>
<Hit_id>gi|16409922|emb|CAC98625.1|</Hit_id>
<Hit_def>lmo0546 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98625</Hit_accession>
<Hit_len>416</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>26.851</Hsp_bit-score>
<Hsp_score>58</Hsp_score>
<Hsp_evalue>1.47044</Hsp_evalue>
<Hsp_query-from>280</Hsp_query-from>
<Hsp_query-to>300</Hsp_query-to>
<Hsp_hit-from>7</Hsp_hit-from>
<Hsp_hit-to>27</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>8</Hsp_identity>
<Hsp_positive>12</Hsp_positive>
<Hsp_align-len>21</Hsp_align-len>
<Hsp_qseq>LLAREGRNNVVKLSAKPADSL</Hsp_qseq>
<Hsp_hseq>LLARENENNPIRVGVIGAGQM</Hsp_hseq>
<Hsp_midline>LLARE NN +++ A +</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>10</Hit_num>
<Hit_id>gi|16410942|emb|CAC99591.1|</Hit_id>
<Hit_def>lmo1513 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99591</Hit_accession>
<Hit_len>382</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>26.851</Hsp_bit-score>
<Hsp_score>58</Hsp_score>
<Hsp_evalue>1.59839</Hsp_evalue>
<Hsp_query-from>107</Hsp_query-from>
<Hsp_query-to>126</Hsp_query-to>
<Hsp_hit-from>277</Hsp_hit-from>
<Hsp_hit-to>296</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>10</Hsp_identity>
<Hsp_positive>15</Hsp_positive>
<Hsp_align-len>20</Hsp_align-len>
<Hsp_qseq>RSGKAEFNLNGLDADEYPHL</Hsp_qseq>
<Hsp_hseq>RSAELDFEVNGLEADTLPHV</Hsp_hseq>
<Hsp_midline>RS + +F +NGL+AD PH+</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>11</Hit_num>
<Hit_id>gi|16412324|emb|CAD01037.1|</Hit_id>
<Hit_def>lmo2824 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAD01037</Hit_accession>
<Hit_len>395</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>26.851</Hsp_bit-score>
<Hsp_score>58</Hsp_score>
<Hsp_evalue>1.72304</Hsp_evalue>
<Hsp_query-from>144</Hsp_query-from>
<Hsp_query-to>170</Hsp_query-to>
<Hsp_hit-from>84</Hsp_hit-from>
<Hsp_hit-to>110</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>10</Hsp_identity>
<Hsp_positive>13</Hsp_positive>
<Hsp_align-len>27</Hsp_align-len>
<Hsp_qseq>NLIRQTVFAVSASETRPILTGVNWKVE</Hsp_qseq>
<Hsp_hseq>NAVKELVLASLFVSARPILEGTEWVKE</Hsp_hseq>
<Hsp_midline>N +++ V A RPIL G W E</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>12</Hit_num>
<Hit_id>gi|16410572|emb|CAC99234.1|</Hit_id>
<Hit_def>lmo1156 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99234</Hit_accession>
<Hit_len>606</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>26.4658</Hsp_bit-score>
<Hsp_score>57</Hsp_score>
<Hsp_evalue>2.25036</Hsp_evalue>
<Hsp_query-from>75</Hsp_query-from>
<Hsp_query-to>141</Hsp_query-to>
<Hsp_hit-from>450</Hsp_hit-from>
<Hsp_hit-to>512</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>16</Hsp_identity>
<Hsp_positive>30</Hsp_positive>
<Hsp_gaps>4</Hsp_gaps>
<Hsp_align-len>67</Hsp_align-len>
<Hsp_qseq>IVLQARFFSEIVKKLPMATVEIEVQNQYLTIIRSGKAEFNLNGLDADEYPHLPQIEEHHAIQIPTDL</Hsp_qseq>
<Hsp_hseq>IGLEDRYLAEDIKKYPLAKVE----SIFHIRHEDGTVQFFDTPLSPTVFAKVVIVKPDGFVPIPGDV</Hsp_hseq>
<Hsp_midline>I L+ R+ +E +KK P+A VE + + G +F L + + ++ + IP D+</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>13</Hit_num>
<Hit_id>gi|16411268|emb|CAC99892.1|</Hit_id>
<Hit_def>lmo1814 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC99892</Hit_accession>
<Hit_len>552</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>26.4658</Hsp_bit-score>
<Hsp_score>57</Hsp_score>
<Hsp_evalue>2.28823</Hsp_evalue>
<Hsp_query-from>211</Hsp_query-from>
<Hsp_query-to>238</Hsp_query-to>
<Hsp_hit-from>495</Hsp_hit-from>
<Hsp_hit-to>522</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>11</Hsp_identity>
<Hsp_positive>18</Hsp_positive>
<Hsp_align-len>28</Hsp_align-len>
<Hsp_qseq>LSKILDDNQELVDIVITETQVLFKAKNV</Hsp_qseq>
<Hsp_hseq>LEKLLDDDSEIVTIIVGEDSDTTKAETL</Hsp_hseq>
<Hsp_midline>L K+LDD+ E+V I++ E KA+ +</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>14</Hit_num>
<Hit_id>gi|16412064|emb|CAD00654.1|</Hit_id>
<Hit_def>peptidoglycan anchored protein (LPXTG motif) [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAD00654</Hit_accession>
<Hit_len>1530</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>26.0806</Hsp_bit-score>
<Hsp_score>56</Hsp_score>
<Hsp_evalue>2.68132</Hsp_evalue>
<Hsp_query-from>250</Hsp_query-from>
<Hsp_query-to>307</Hsp_query-to>
<Hsp_hit-from>1270</Hsp_hit-from>
<Hsp_hit-to>1322</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>17</Hsp_identity>
<Hsp_positive>27</Hsp_positive>
<Hsp_gaps>9</Hsp_gaps>
<Hsp_align-len>60</Hsp_align-len>
<Hsp_qseq>PDTTS--LIPQESKTEIVVNTKEFLQAIDRASLLAREGRNNVVKLSAKPADSLEISSNSP</Hsp_qseq>
<Hsp_hseq>PDAGSVKIIKQDSENGVRLAGAEF-------SLIAENGETLQTNLKTDEAGELEVNNLAP</Hsp_hseq>
<Hsp_midline>PD S +I Q+S+ + + EF SL+A G L A LE+++ +P</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>15</Hit_num>
<Hit_id>gi|16411702|emb|CAD00310.1|</Hit_id>
<Hit_def>lmo2232 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAD00310</Hit_accession>
<Hit_len>434</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>26.0806</Hsp_bit-score>
<Hsp_score>56</Hsp_score>
<Hsp_evalue>2.86641</Hsp_evalue>
<Hsp_query-from>118</Hsp_query-from>
<Hsp_query-to>146</Hsp_query-to>
<Hsp_hit-from>346</Hsp_hit-from>
<Hsp_hit-to>377</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>10</Hsp_identity>
<Hsp_positive>19</Hsp_positive>
<Hsp_gaps>3</Hsp_gaps>
<Hsp_align-len>32</Hsp_align-len>
<Hsp_qseq>LDADEYPHLPQIEEHHAI---QIPTDLLKNLI</Hsp_qseq>
<Hsp_hseq>FDADEIPEIRKIKDGHYIVDAKLLIDEVNNIL</Hsp_hseq>
<Hsp_midline> DADE P + +I++ H I ++ D + N++</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>16</Hit_num>
<Hit_id>gi|16410089|emb|CAC98778.1|</Hit_id>
<Hit_def>lmo0700 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98778</Hit_accession>
<Hit_len>515</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>26.0806</Hsp_bit-score>
<Hsp_score>56</Hsp_score>
<Hsp_evalue>2.91464</Hsp_evalue>
<Hsp_query-from>129</Hsp_query-from>
<Hsp_query-to>231</Hsp_query-to>
<Hsp_hit-from>360</Hsp_hit-from>
<Hsp_hit-to>461</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>24</Hsp_identity>
<Hsp_positive>49</Hsp_positive>
<Hsp_gaps>13</Hsp_gaps>
<Hsp_align-len>109</Hsp_align-len>
<Hsp_qseq>IEEHHAIQI--PTDL---LKNLIRQTVFAVSASETRPILTGVNWK-VENGELLCTATDSHRLALRKAKLDIPEDSSYNVVIPGKSLTELSKILDDNQELVDIVITETQV</Hsp_qseq>
<Hsp_hseq>IEEGKTVEVIFPLEVDGLLKTPMYQIFNPAAAKEMAQLMLGIQAKEVAEKE----ATTPAEIIEPEKPAE-PI--KHTVIEEKETLSEMEQILEDIPVTLEVVFGTAKV</Hsp_hseq>
<Hsp_midline>IEE +++ P ++ LK + Q +A E ++ G+ K V E AT + + + P + V+ ++L+E+ +IL+D +++V +V</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>17</Hit_num>
<Hit_id>gi|16409997|emb|CAC98686.1|</Hit_id>
<Hit_def>lmo0608 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98686</Hit_accession>
<Hit_len>605</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>25.6954</Hsp_bit-score>
<Hsp_score>55</Hsp_score>
<Hsp_evalue>3.68169</Hsp_evalue>
<Hsp_query-from>66</Hsp_query-from>
<Hsp_query-to>119</Hsp_query-to>
<Hsp_hit-from>188</Hsp_hit-from>
<Hsp_hit-to>249</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>17</Hsp_identity>
<Hsp_positive>27</Hsp_positive>
<Hsp_gaps>8</Hsp_gaps>
<Hsp_align-len>62</Hsp_align-len>
<Hsp_qseq>IVTIDQPGSIVLQA-------RFFSEIVKKLPMATVEIEVQNQYLTIIRS-GKAEFNLNGLD</Hsp_qseq>
<Hsp_hseq>IVLVTVPISIILVAIIAGRSQRYFGAQQRNLGILNDTVEETYGGQTIIKAFGQEKKTLVKFD</Hsp_hseq>
<Hsp_midline>IV + P SI+L A R+F + L + +E TII++ G+ + L D</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>18</Hit_num>
<Hit_id>gi|16410039|emb|CAC98728.1|</Hit_id>
<Hit_def>lmo0650 [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAC98728</Hit_accession>
<Hit_len>896</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>25.3102</Hsp_bit-score>
<Hsp_score>54</Hsp_score>
<Hsp_evalue>4.53564</Hsp_evalue>
<Hsp_query-from>291</Hsp_query-from>
<Hsp_query-to>317</Hsp_query-to>
<Hsp_hit-from>228</Hsp_hit-from>
<Hsp_hit-to>254</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>10</Hsp_identity>
<Hsp_positive>15</Hsp_positive>
<Hsp_align-len>27</Hsp_align-len>
<Hsp_qseq>KLSAKPADSLEISSNSPEIGKVVEAVL</Hsp_qseq>
<Hsp_hseq>ELKAKANQVVELNEKIPELNKATENVL</Hsp_hseq>
<Hsp_midline>+L AK +E++ PE+ K E VL</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>19</Hit_num>
<Hit_id>gi|16411502|emb|CAD00110.1|</Hit_id>
<Hit_def>ftsZ [Listeria monocytogenes]</Hit_def>
<Hit_accession>CAD00110</Hit_accession>
<Hit_len>391</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>24.925</Hsp_bit-score>
<Hsp_score>53</Hsp_score>
<Hsp_evalue>6.28001</Hsp_evalue>
<Hsp_query-from>251</Hsp_query-from>
<Hsp_query-to>296</Hsp_query-to>
<Hsp_hit-from>159</Hsp_hit-from>
<Hsp_hit-to>204</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>14</Hsp_identity>
<Hsp_positive>21</Hsp_positive>
<Hsp_align-len>46</Hsp_align-len>
<Hsp_qseq>DTTSLIPQESKTEIVVNTKEFLQAIDRASLLAREGRNNVVKLSAKP</Hsp_qseq>
<Hsp_hseq>DTLIVIPNDRLLQIVDKNTPMLEAFREADNVLRQGVQGISDLIAVP</Hsp_hseq>
<Hsp_midline>DT +IP + +IV L+A A + R+G + L A P</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
</Iteration_hits>
<Iteration_stat>
<Statistics>
<Statistics_db-num>2846</Statistics_db-num>
<Statistics_db-len>870878</Statistics_db-len>
<Statistics_hsp-len>82</Statistics_hsp-len>
<Statistics_eff-space>1.88702e+08</Statistics_eff-space>
<Statistics_kappa>0.0450367</Statistics_kappa>
<Statistics_lambda>0.267</Statistics_lambda>
<Statistics_entropy>0.14</Statistics_entropy>
</Statistics>
</Iteration_stat>
<Iteration_message>CONVERGED</Iteration_message>
</Iteration>
</BlastOutput_iterations>
</BlastOutput>