## sequence-region Contig1 1 37450
Contig1 confirmed transcript 1001 2000 42 + . Transcript trans-1; Gene "abc-1"; Gene "xyz-2"; Note "function unknown"
Contig1 confirmed exon 1001 1100 . + . Transcript trans-1
Contig1 confirmed exon 1201 1300 . + . Transcript trans-1
Contig1 confirmed exon 1401 1450 . + . Transcript trans-1
Contig1 confirmed CDS 1051 1100 . + 0 Transcript trans-1
Contig1 confirmed CDS 1201 1300 . + 2 Transcript trans-1
Contig1 confirmed CDS 1401 1440 . + 0 Transcript trans-1
Contig1 est similarity 1001 1100 96 . . Target "EST:CEESC13F" 1 100
Contig1 est similarity 1201 1300 99 . . Target "EST:CEESC13F" 101 200
Contig1 est similarity 1401 1450 99 . . Target "EST:CEESC13F" 201 250
Contig1 tc1 transposon 5001 6000 . + . Transposon c128.1
Contig1 tc1 transposon 8001 9000 . - . Transposon c128.2
Contig1 confirmed transcript 30001 31000 . - . Transcript trans-2; Gene "xyz-2"; Note "Terribly interesting"
Contig1 confirmed exon 30001 30100 . - . Transcript trans-2; Gene "abc-1"; Note "function unknown"
Contig1 confirmed exon 30701 30800 . - . Transcript trans-2
Contig1 confirmed exon 30801 31000 . - . Transcript trans-2
## sequence-region Contig2 1 37450
Contig2 clone Component 1 2000 . . . Target "Clone:AL12345.1" 1 2000; Note "Terribly interesting"
Contig2 clone Component 2001 5000 . . . Target "Clone:AL11111.1" 6000 3001
Contig2 clone Component 5001 20000 . . . Target "Clone:AC13221.2" 1 15000
Contig2 clone Component 2001 37450 . . . Target "Clone:M7.3" 1001 36450
Contig2 predicted transcript 2501 4500 . + . Transcript trans-3 ; Alias trans-18
Contig2 predicted transcript 5001 8001 . - . Transcript trans-4
#processed_transcript
Contig3 clone Component 1 50000 . . . Clone AL12345.2
Contig3 confirmed mRNA 32000 35000 . + . mRNA trans-8
Contig3 confirmed UTR 32000 32100 . + . mRNA trans-8
Contig3 confirmed CDS 32101 33000 . + . mRNA trans-8
Contig3 confirmed CDS 34000 34500 . + . mRNA trans-8
Contig3 confirmed CDS 34600 34900 . + . mRNA trans-8
Contig3 confirmed UTR 34901 35000 . + . mRNA trans-8
## preferred group assignments
Contig4 clone Component 1 50000 . . . Clone ABC123
Contig4 confirmed gene 32000 35000 . + . Misc thing1 ; gene gene-9
Contig4 confirmed mRNA 32000 35000 . + . Misc thing2 ; mRNA trans-9 ; gene gene-9
Contig4 confirmed CDS 32000 35000 . + . Misc thing3 ; mRNA trans-9