No. words: 2989; after pruning: 2826
Histogram of relative pair offsets, for read pairs with multiple alignments:
Pass 1
Gap Score
Pass: 1
#reads #contigs (not counting singlets)
1 2
N.B. Following not based on all pairs!!
Lowest # merges # failures
LLR score
Gap # merges # failures
size
Offset
Pass 3
Gap Score
Merge:(0) 0 0.0 15.1 (1,1:768) 628 3.27 0.00 0.00 ML4924F 10 713 (21) C ML4924R (3) 760 57 *
Pass: 3
#reads #contigs (not counting singlets)
2 1
N.B. Following not based on all pairs!!
Lowest # merges # failures
LLR score
0.0 1 0
Gap # merges # failures
size
0 1 0
Offset
0 1
Pass 4
Gap Score
Pass: 4
#reads #contigs (not counting singlets)
2 1
N.B. Following not based on all pairs!!
Lowest # merges # failures
LLR score
Gap # merges # failures
size
Offset
Read equivalence class histogram:
1 2
2 1
Chimera merges:
Contig 1: 302 nodes
153 str. conn. components
Path
1 C ML4924R 763
19 ML4924F 25
275 C ML4924R 489
610 ML4924F 616
622 C ML4924R 142
660 ML4924F 666
668 C ML4924R 96
Contig length: old 769, new 763
Contig length: old 763, new 708
New start: 0
Contig 1 unpadded => padded conversion:
200 => 200
400 => 400
600 => 600