VV TRANSFAC MATRIX TABLE, Release 6.4 - licensed - 2002-12-02, (C) Biobase GmbH
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//
AC M00001
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ID V$MYOD_01
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DT 19.10.1992 (created); ewi.
DT 22.10.1997 (updated); dbo.
CO Copyright (C), Biobase GmbH.
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NA MyoD
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DE myoblast determination gene product
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BF T00526; MyoD; Species: mouse, Mus musculus.
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P0 A C G T
01 1 2 2 0 S
02 2 1 2 0 R
03 3 0 1 1 A
04 0 5 0 0 C
05 5 0 0 0 A
06 0 0 4 1 G
07 0 1 4 0 G
08 0 0 0 5 T
09 0 0 5 0 G
10 0 1 2 2 K
11 0 2 0 3 Y
12 1 0 3 1 G
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BA 5 functional elements in 3 genes
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CC no comment
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//
AC M00002
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ID V$E47_01
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DT 19.10.1992 (created); ewi.
DT 18.07.2000 (updated); ewi.
CO Copyright (C), Biobase GmbH.
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NA E47
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DE E47
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BF T00207; E47; Species: human, Homo sapiens.
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P0 A C G T
01 4 4 3 0 V
02 2 5 4 0 S
03 3 2 4 2 N
04 2 0 9 0 G
05 0 11 0 0 C
06 11 0 0 0 A
07 0 0 11 0 G
08 1 2 8 0 G
09 0 0 0 11 T
10 0 0 11 0 G
11 0 0 4 7 K
12 1 4 3 3 N
13 1 6 2 2 C
14 1 4 4 2 N
15 1 4 2 3 N
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BA 11 selected strong binding sites for E47, E47-MyoD, E12+MyoD and (weak) for
BA E12
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BS R05108; Start: 3; Length: 15; Gaps: 17; Orientation: p.
BS R05109; Start: 1; Length: 15; Gaps:; Orientation: p.
BS R05110; Start: 5; Length: 15; Gaps:; Orientation: p.
BS R05111; Start: 5; Length: 15; Gaps:; Orientation: p.
BS R05112; Start: 8; Length: 15; Gaps:; Orientation: p.
BS R05113; Start: 9; Length: 15; Gaps:; Orientation: p.
BS R05114; Start: 8; Length: 15; Gaps:; Orientation: p.
BS R05115; Start: 7; Length: 15; Gaps:; Orientation: p.
BS R05116; Start: 11; Length: 15; Gaps:; Orientation: p.
BS R05117; Start: 5; Length: 15; Gaps:; Orientation: p.
BS R05118; Start: 5; Length: 15; Gaps:; Orientation: p.
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