#!/usr/bin/env perl
# $Id: get_relationship_types.pl 2013-09-29 erick.antezana $
#
# Script : get_relationship_types.pl
# Purpose : Find all the relationships in a given ontology.
# Usage : get_relationships_type.pl my_ontology.obo > terms.txt
# License : Copyright (c) 2006-2013 by Erick Antezana. All rights reserved.
# This program is free software; you can redistribute it and/or
# modify it under the same terms as Perl itself.
# Contact : Erick Antezana <erick.antezana -@- gmail.com>
#
################################################################################
use OBO::Parser::OBOParser;
my $my_parser = OBO::Parser::OBOParser->new();
my $ontology = $my_parser->work(shift @ARGV);
my @my_rels= @{$ontology->get_relationship_types()}; # get all the relationships types
foreach my $r (@my_rels) {
print $r->name(), "\n";
}
exit 0;
__END__
=head1 NAME
get_relationship_types.pl - Find all the relationship types in a given ontology.
=head1 DESCRIPTION
This script retrieves all the relationship types in a given ontology.
=head1 AUTHOR
Erick Antezana, E<lt>erick.antezana -@- gmail.comE<gt>
=head1 COPYRIGHT AND LICENSE
Copyright (c) 2006-2013 by Erick Antezana
This library is free software; you can redistribute it and/or modify
it under the same terms as Perl itself, either Perl version 5.8.7 or,
at your option, any later version of Perl 5 you may have available.
=cut