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EASR / ONTO-PERL-1.45 / t / data / test_ulo_apo2.owl 
<?xml version="1.0"?>
<rdf:RDF
	xmlns="http://www.cellcycleontology.org/obo/owl/"
	xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
	xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
	xmlns:owl="http://www.w3.org/2002/07/owl#"
	xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
	xmlns:oboInOwl="http://www.cellcycleontology.org/formats/oboInOwl#"
	xmlns:oboContent="http://www.cellcycleontology.org/obo/owl/"
	xml:base="http://www.cellcycleontology.org/obo/owl/"
>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#hasURI"/>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#hasAlternativeId"/>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#hasDate"/>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#hasVersion"/>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#hasDbXref"/>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#hasDefaultNamespace"/>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#hasNamespace"/>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#hasDefinition"/>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#hasExactSynonym"/>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#hasNarrowSynonym"/>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#hasBroadSynonym"/>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#hasRelatedSynonym"/>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#hasSynonymType"/>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#hasSubset"/>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#inSubset"/>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#savedBy"/>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#replacedBy"/>
<owl:AnnotationProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#consider"/>
<owl:Class rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#DbXref"/>
<owl:Class rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#Definition"/>
<owl:Class rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#Subset"/>
<owl:Class rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#Synonym"/>
<owl:Class rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#SynonymType"/>
<owl:Class rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#ObsoleteClass"/>
<owl:ObjectProperty rdf:about="http://www.cellcycleontology.org/formats/oboInOwl#ObsoleteProperty"/>

<owl:Ontology rdf:about="">
	<oboInOwl:hasDate>28:06:2006 13:57</oboInOwl:hasDate>
	<oboInOwl:savedBy>easr</oboInOwl:savedBy>
	<oboInOwl:hasDefaultNamespace>apo</oboInOwl:hasDefaultNamespace>
	<rdfs:comment><p>This file holds the Upper Level Ontology in APO.</p></rdfs:comment>
</owl:Ontology>

<owl:Class rdf:about="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000000">
	<rdfs:label xml:lang="en">cell-cycle entity</rdfs:label>
	<oboInOwl:hasDefinition>
		<oboInOwl:Definition>
			<rdfs:label xml:lang="en">A process or continuant.</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>APO:ea</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/APO#APO_ea</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Definition>
	</oboInOwl:hasDefinition>
	<oboInOwl:hasExactSynonym>
		<oboInOwl:Synonym>
			<rdfs:label xml:lang="en">cell cycle entity</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>APO:ea</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/APO#APO_ea</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Synonym>
	</oboInOwl:hasExactSynonym>
</owl:Class>

<owl:Class rdf:about="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000001">
	<rdfs:label xml:lang="en">continuant</rdfs:label>
	<oboInOwl:hasDefinition>
		<oboInOwl:Definition>
			<rdfs:label xml:lang="en">Entities which endure, or continue to exist, through time while undergoing different sort of changes, including changes of place.</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>PMID:15892874</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/PMID#PMID_15892874</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Definition>
	</oboInOwl:hasDefinition>
	<oboInOwl:hasExactSynonym>
		<oboInOwl:Synonym>
			<rdfs:label xml:lang="en">endurant</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>PMID:15892874</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/PMID#PMID_15892874</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Synonym>
	</oboInOwl:hasExactSynonym>
	<oboInOwl:hasBroadSynonym>
		<oboInOwl:Synonym>
			<rdfs:label xml:lang="en">thing</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>PMID:15892874</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/PMID#PMID_15892874</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Synonym>
	</oboInOwl:hasBroadSynonym>
	<rdfs:subClassOf rdf:resource="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000000"/>
	<owl:disjointWith rdf:resource="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000002"/>
</owl:Class>

<owl:Class rdf:about="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000002">
	<rdfs:label xml:lang="en">process</rdfs:label>
	<oboInOwl:hasDefinition>
		<oboInOwl:Definition>
			<rdfs:label xml:lang="en">Entities that unfold themselves in successive temporal phases.</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>PMID:15892874</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/PMID#PMID_15892874</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Definition>
	</oboInOwl:hasDefinition>
	<oboInOwl:hasExactSynonym>
		<oboInOwl:Synonym>
			<rdfs:label xml:lang="en">perdurant</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>PMID:15892874</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/PMID#PMID_15892874</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Synonym>
	</oboInOwl:hasExactSynonym>
	<oboInOwl:hasBroadSynonym>
		<oboInOwl:Synonym>
			<rdfs:label xml:lang="en">ocurrent</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>PMID:15892874</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/PMID#PMID_15892874</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Synonym>
	</oboInOwl:hasBroadSynonym>
	<rdfs:subClassOf rdf:resource="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000000"/>
	<owl:disjointWith rdf:resource="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000001"/>
</owl:Class>

<owl:Class rdf:about="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000003">
	<rdfs:label xml:lang="en">biopolymer</rdfs:label>
	<oboInOwl:hasDefinition>
		<oboInOwl:Definition>
			<rdfs:label xml:lang="en">A polymer, such as a protein, nucleic acid, or transcript, ocurring in, or formed by, living systems.</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>APO:ea</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/APO#APO_ea</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Definition>
	</oboInOwl:hasDefinition>
	<oboInOwl:hasExactSynonym>
		<oboInOwl:Synonym>
			<rdfs:label xml:lang="en">bio-polymer</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>APO:ea</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/APO#APO_ea</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Synonym>
	</oboInOwl:hasExactSynonym>
	<rdfs:subClassOf rdf:resource="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000001"/>
</owl:Class>

<owl:Class rdf:about="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000004">
	<rdfs:label xml:lang="en">gene</rdfs:label>
	<oboInOwl:hasDefinition>
		<oboInOwl:Definition>
			<rdfs:label xml:lang="en">A locatable region of genomic sequence, corresponding to a unit of inheritance, which is associated with regulatory regions, transcribed regions and%2For other functional sequence regions.</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>SO:0000704</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/SO#SO_0000704</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Definition>
	</oboInOwl:hasDefinition>
	<oboInOwl:hasDbXref>
		<oboInOwl:DbXref>
			<rdfs:label>SO:0000704</rdfs:label>
			<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/SO#SO_0000704</oboInOwl:hasURI>
		</oboInOwl:DbXref>
	</oboInOwl:hasDbXref>
	<rdfs:subClassOf rdf:resource="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000003"/>
	<owl:disjointWith rdf:resource="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000005"/>
</owl:Class>

<owl:Class rdf:about="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000005">
	<rdfs:label xml:lang="en">protein</rdfs:label>
	<oboInOwl:hasDefinition>
		<oboInOwl:Definition>
			<rdfs:label xml:lang="en">One or more polypeptides which may, or may not, be covalently bonded, and which assume a native secondary and tertiary structure.</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>SO:0000358</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/SO#SO_0000358</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Definition>
	</oboInOwl:hasDefinition>
	<oboInOwl:hasDbXref>
		<oboInOwl:DbXref>
			<rdfs:label>SO:0000358</rdfs:label>
			<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/SO#SO_0000358</oboInOwl:hasURI>
		</oboInOwl:DbXref>
	</oboInOwl:hasDbXref>
	<rdfs:subClassOf rdf:resource="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000003"/>
	<owl:disjointWith rdf:resource="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000004"/>
</owl:Class>

<owl:Class rdf:about="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000006">
	<rdfs:label xml:lang="en">transcript</rdfs:label>
	<oboInOwl:hasDefinition>
		<oboInOwl:Definition>
			<rdfs:label xml:lang="en">An RNA synthesized on a DNA or RNA template by an RNA polymerase.</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>SO:0000673</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/SO#SO_0000673</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Definition>
	</oboInOwl:hasDefinition>
	<oboInOwl:hasDbXref>
		<oboInOwl:DbXref>
			<rdfs:label>SO:0000673</rdfs:label>
			<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/SO#SO_0000673</oboInOwl:hasURI>
		</oboInOwl:DbXref>
	</oboInOwl:hasDbXref>
	<rdfs:subClassOf rdf:resource="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000003"/>
</owl:Class>

<owl:Class rdf:about="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000007">
	<rdfs:label xml:lang="en">interaction</rdfs:label>
	<oboInOwl:hasDefinition>
		<oboInOwl:Definition>
			<rdfs:label xml:lang="en">Any reciprocal or mutual action or effect between two continuants.</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>APO:ea</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/APO#APO_ea</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Definition>
	</oboInOwl:hasDefinition>
	<rdfs:subClassOf rdf:resource="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000002"/>
</owl:Class>

<owl:Class rdf:about="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000008">
	<rdfs:label xml:lang="en">pathway</rdfs:label>
	<oboInOwl:hasDefinition>
		<oboInOwl:Definition>
			<rdfs:label xml:lang="en">A chain of interactions undergone by a given biopolymer or molecular entity in a particular organism.</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>APO:ea</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/APO#APO_ea</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Definition>
	</oboInOwl:hasDefinition>
	<rdfs:subClassOf rdf:resource="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000002"/>
</owl:Class>

<owl:Class rdf:about="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000009">
	<rdfs:label xml:lang="en">small molecule</rdfs:label>
	<oboInOwl:hasDefinition>
		<oboInOwl:Definition>
			<rdfs:label xml:lang="en">A small structural unit of matter consisting of one or more atoms.</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>APO:ea</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/APO#APO_ea</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Definition>
	</oboInOwl:hasDefinition>
	<rdfs:subClassOf rdf:resource="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000001"/>
</owl:Class>

<owl:Class rdf:about="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000010">
	<rdfs:label xml:lang="en">complex</rdfs:label>
	<oboInOwl:hasDefinition>
		<oboInOwl:Definition>
			<rdfs:label xml:lang="en">Any distinct chemical species in which two or more identical or nonidentical chemical species are associated.</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>APO:ea</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/APO#APO_ea</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Definition>
	</oboInOwl:hasDefinition>
	<rdfs:subClassOf rdf:resource="http://www.cellcycleontology.org/obo/owl/APO#APO_U0000001"/>
</owl:Class>

<owl:ObjectProperty rdf:about="http://www.cellcycleontology.org/obo/owl/APO#is_a">
	<rdfs:label xml:lang="en">is_a</rdfs:label>
	<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The is_a relationship is considered axiomatic by the obo file format specification, and by OWL</rdfs:comment>
	<oboInOwl:hasDefinition>
		<oboInOwl:Definition>
			<rdfs:label xml:lang="en">For continuants%3A C is_a C' if and only if%3A given any c that instantiates C at a time t, c instantiates C' at t. For processes%3A P is_a P' if and only if%3A that given any p that instantiates P, then p instantiates P'.</rdfs:label>
			<oboInOwl:hasDbXref>
				<oboInOwl:DbXref>
					<rdfs:label>PMID:15892874</rdfs:label>
					<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/PMID#PMID_15892874</oboInOwl:hasURI>
				</oboInOwl:DbXref>
			</oboInOwl:hasDbXref>
		</oboInOwl:Definition>
	</oboInOwl:hasDefinition>
	<oboInOwl:hasExactSynonym>
		<oboInOwl:Synonym>
			<rdfs:label xml:lang="en">is_subtype_of</rdfs:label>
		</oboInOwl:Synonym>
	</oboInOwl:hasExactSynonym>
	<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
	<oboInOwl:hasDbXref>
		<oboInOwl:DbXref>
			<rdfs:label>owl:subClassOf</rdfs:label>
			<oboInOwl:hasURI rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.cellcycleontology.org/obo/owl/owl#owl_subClassOf</oboInOwl:hasURI>
		</oboInOwl:DbXref>
	</oboInOwl:hasDbXref>
</owl:ObjectProperty>

</rdf:RDF>

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