9 888
human
AAGCTTCACC GGCGCAGTCA TTCTCATAAT CGCCCACGGA CTTACATCCT CATTACTATT 60
CTGCCTAGCA AACTCAAACT ACGAACGCAC TCACAGTCGC ATCATAATCC TCTCTCAAGG 120
ACTTCAAACT CTACTCCCAC TAATAGCTTT TTGATGACTT CTAGCAAGCC TCGCTAACCT 180
CGCCTTACCC CCCACTATTA ACCTACTGGG AGAACTCTCT GTGCTAGTAA CCACGTTCTC 240
CTGATCAAAT ATCACTCTCC TACTTACAGG ACTCAACATA CTAGTCACAG CCCTATACTC 300
CCTCTACATA TTTACCACAA CACAATGGGG CTCACTCACC CACCACATTA ACAACATAAA 360
ACCCTCATTC ACACGAGAAA ACACCCTCAT GTTCATACAC CTATCCCCCA TTCTCCTCCT 420
ATCCCTCAAC CCCGACATCA TTACCGGGTT TTCCTCTTGT AAATATAGTT TAACAAAACA 480
TCAGATTGTG AATCTGACAA CAGAGGCTTA CGCCCCTTAT TTACCGAGAA AGCTCACAAG 540
AACTGCTAAC TCATGCCCCA TGTCTGACAA CATGGCTTTC TCACTTTTAA AGGATAACAG 600
CTATCCATTG GTCTTAGGCC CCAAAAATTT GGTGCAACTC CAAATAAAAG TAATAATGCA 660
CACTACTATA ACCACCCTAA CCCTGACTTC CCTAATTCCC CCCATCCTTA CCACCCTCGT 720
TAACCCTAAC AAAAAAAACT CATACCCCCA TTATGTAAAA TCCATTGTCG CATCCACCTT 780
TATTATCAGT CTCTTCCCCA CAACAATATT CATGTGCCTA GACCAAGAAG TTATTATCTC 840
GAACTGACAC TGAGCCACAA CCCAAACAAC CCAGCTCTCC CTAAGCTT 888
chimpanzee
AAGCTTCACC GGCGCAATTA TCCTCATAAT CGCCCACGGA CTTACATCCT CATTATTATT 60
CTGCCTAGCA AACTCAAATT ATGAACGCAC CCACAGTCGC ATCATAATTC TCTCCCAAGG 120
ACTTCAAACT CTACTCCCAC TAATAGCCTT TTGATGACTC CTAGCAAGCC TCGCTAACCT 180
CGCCCTACCC CCTACCATTA ATCTCCTAGG GGAACTCTCC GTGCTAGTAA CCTCATTCTC 240
CTGATCAAAT ACCACTCTCC TACTCACAGG ATTCAACATA CTAATCACAG CCCTGTACTC 300
CCTCTACATG TTTACCACAA CACAATGAGG CTCACTCACC CACCACATTA ATAACATAAA 360
GCCCTCATTC ACACGAGAAA ATACTCTCAT ATTTTTACAC CTATCCCCCA TCCTCCTTCT 420
ATCCCTCAAT CCTGATATCA TCACTGGATT CACCTCCTGT AAATATAGTT TAACAAAACA 480
TCAGATTGTG AATCTGACAA CAGAGGCTCA CGCCCCTTAT TTACCGAGAA AGCTTATAAG 540
AACTGCTAAT TCATATCCCA TGCCTGACAA CATGGCTTTC TCACTTTTAA AGGATAACAG 600
CCATCCGTTG GTCTTAGGCC CCAAAAATTT GGTGCAACTC CAAATAAAAG TAATAATGTA 660
TACTACCATA ACCACCTTAA CCCTAACTCC CTTAATTCTC CCCATCCTCA CCACCCTCAT 720
TAACCCTAAC AAAAAAAACT CATATCCCCA TTATGTGAAA TCCATTATCG CGTCCACCTT 780
TATCATTAGC CTTTTCCCCA CAACAATATT CATATGCCTA GACCAAGAAG CTATTATCTC 840
AAACTGGCAC TGAGCAACAA CCCAAACAAC CCAGCTCTCC CTAAGCTT 888
gorilla
AAGCTTCACC GGCGCAGTTG TTCTTATAAT TGCCCACGGA CTTACATCAT CATTATTATT 60
CTGCCTAGCA AACTCAAACT ACGAACGAAC CCACAGCCGC ATCATAATTC TCTCTCAAGG 120
ACTCCAAACC CTACTCCCAC TAATAGCCCT TTGATGACTT CTGGCAAGCC TCGCCAACCT 180
CGCCTTACCC CCCACCATTA ACCTACTAGG AGAGCTCTCC GTACTAGTAA CCACATTCTC 240
CTGATCAAAT ACCACCCTTT TACTTACAGG ATCTAACATA CTAATCACAG CCCTGTACTC 300
CCTTTATATA TTTACCACAA CACAATGAGG CCCACTCACA CACCACATCA CCAACATAAA 360
ACCCTCATTT ACACGAGAAA ACATCCTCAT ATTCATGCAC CTATCCCCCA TCCTCCTCCT 420
ATCCCTCAAC CCCGATATTA TCACCGGGTT CACCTCCTGT AAATATAGTT TAACAAAACA 480
TCAGATTGTG AATCTGATAA CAGAGGCTCA CACCCCTTAT TTACCGAGAA AGCTCGTAAG 540
AGCTGCTAAC TCATACCCCG TGCTTGACAA CATGGCTTTC TCACTTTTAA AGGATAACAG 600
CTATCCATTG GTCTTAGGAC CCAAAAATTT GGTGCAACTC CAAATAAAAG TAATAATGTA 660
CGCTACCATA ACCACCTTAG CCCTAACTTC CTTAATTCCC CCTATCCTTA CCACCTTCAT 720
CAATCCTAAC AAAAAAAGCT CATACCCCCA TTACGTAAAA TCTATCGTCG CATCCACCTT 780
TATCATCAGC CTCTTCCCCA CAACAATATT TCTATGCCTA GACCAAGAAG CTATTATCTC 840
AAGCTGACAC TGAGCAACAA CCCAAACAAT TCAACTCTCC CTAAGCTT 888
orang-utan
AAGCTTCACC GGCGCAACCA CCCTCATGAT TGCCCATGGA CTCACATCCT CCCTACTGTT 60
CTGCCTAGCA AACTCAAACT ACGAACGAAC CCACAGCCGC ATCATAATCC TCTCTCAAGG 120
CCTTCAAACT CTACTCCCCC TAATAGCCCT CTGATGACTT CTAGCAAGCC TCACTAACCT 180
TGCCCTACCA CCCACCATCA ACCTTCTAGG AGAACTCTCC GTACTAATAG CCATATTCTC 240
TTGATCTAAC ATCACCATCC TACTAACAGG ACTCAACATA CTAATCACAA CCCTATACTC 300
TCTCTATATA TTCACCACAA CACAACGAGG TACACCCACA CACCACATCA ACAACATAAA 360
ACCTTCTTTC ACACGCGAAA ATACCCTCAT GCTCATACAC CTATCCCCCA TCCTCCTCTT 420
ATCCCTCAAC CCCAGCATCA TCGCTGGGTT CGCCTACTGT AAATATAGTT TAACAAAACA 480
TTAGATTGTG AATCTAATAA TAGGGCCCCA CACCCCTTAT TTACCGAGAA AGCTCACAAG 540
AACTGCTAAC TCTCACTCCA TGTGTGACAA CATGGCTTTC TCGCTTTTAA AGGATAACAG 600
CTATCCCTTG GTCTTAGGAT CCAAAAATTT GGTGCAACTC CAAATAAAAG TAACAATGTT 660
TACCACCATA ACTGCCCTCA CCTTAACTTC CCTAATCCCC CCCATTACCG CTACCCTCAT 720
TAACCCCAAC AAAAAAAACC CATACCCCCA CTATGTAAAA ACGGCCATCG CATCCGCCTT 780
TACTATCAGC CTTATCCCAA CAACAATATT TATCTGCCTA GGACAAGAAA CCATCGTCAC 840
AAACTGATGC TGAACAACCA CCCAGACACT ACAACTCTCA CTAAGCTT 888
gibbon
AAGCTTTACA GGTGCAACCG TCCTCATAAT CGCCCACGGA CTAACCTCTT CCCTGCTATT 60
CTGCCTTGCA AACTCAAACT ACGAACGAAC TCACAGCCGC ATCATAATCC TATCTCGAGG 120
GCTCCAAGCC TTACTCCCAC TGATAGCCTT CTGATGACTC GCAGCAAGCC TCGCTAACCT 180
CGCCCTACCC CCCACTATTA ACCTCCTAGG TGAACTCTTC GTACTAATGG CCTCCTTCTC 240
CTGGGCAAAC ACTACTATTA CACTCACCGG GCTCAACGTA CTAATCACGG CCCTATACTC 300
CCTTTACATA TTTATCATAA CACAACGAGG CACACTTACA CACCACATTA AAAACATAAA 360
ACCCTCACTC ACACGAGAAA ACATATTAAT ACTTATGCAC CTCTTCCCCC TCCTCCTCCT 420
AACCCTCAAC CCTAACATCA TTACTGGCTT TACTCCCTGT AAACATAGTT TAATAAAACA 480
TTAGATTGTG AATCTAACAA TAGAGGCTCG AACCTCTTGC TTACCGAGAA AGCCCACAAG 540
AACTGCTAAC TCACTATCCA TGTATGACAA CATGGCTTTC TCACTTTTAA AGGATAACAG 600
CTATCCATTG GTCTTAGGAC CCAAAAATTT GGTGCAACTC CAAATAAAAG TAATAATGTA 660
CACCACCATA GCCATTCTAA CGCTAACCTC CCTAATTCCC CCCATTACAG CCACCCTTAT 720
TAACCCCAAT AAAAAGAACT TATACCCGCA CTACGTAAAA ATGACCATTG CCTCTACCTT 780
TATAATCAGC CTATTTCCCA CAATAATATT CATGTGCACA GACCAAGAAA CCATTATTTC 840
AAACTGACAC TGAACTGCAA CCCAAACGCT AGAACTCTCC CTAAGCTT 888
ce macaque
AAGCTTCTCC GGCGCAACCA CCCTTATAAT CGCCCACGGG CTCACCTCTT CCATGTATTT 60
CTGCTTGGCC AATTCAAACT ATGAGCGCAC TCATAACCGT ACCATACTAC TATCCCGAGG 120
ACTTCAAATT CTACTTCCAT TGACAGCCTT CTGATGACTC ACAGCAAGCC TTACTAACCT 180
TGCCCTACCC CCCACTATTA ATCTACTAGG CGAACTCTTT GTAATCACAA CTTCATTTTC 240
CTGATCCCAT ATCACCATTG TGTTAACGGG CCTTAATATA CTAATCACAG CCCTCTACTC 300
TCTCCACATG TTCATTACAG TACAACGAGG AACACTCACA CACCACATAA TCAATATAAA 360
ACCCCCCTTC ACACGAGAAA ACATATTAAT ATTCATACAC CTCGCTCCAA TTATCCTTCT 420
ATCTCTCAAC CCCAACATCA TCCTGGGGTT TACCTCCTGT AAATATAGTT TAACAAAACA 480
TTAGATTGTG AATCTAACTA TAGAGGCCTA CCCTTCTTAT TTACCGAGAA AACTCGCAAG 540
GACTGCTAAT CCATGCCCCG TACTTAAAAC TACGGTTTCC TCACTTTTAA AGGATAACAG 600
CTATCCATTG ACCTTAGGAG TCAAAAAATT GGTGCAACTC CAAATAAAAG TAATAATGCA 660
CACCCCCATC ATAATAACAA CCCTCATCTC CCTGACCCTT CCAATTTTTG CCACCCTCAC 720
CAACCCCTAT AAAAAACGTT CATACCCAGA CTACGTAAAA ACAACCGTAA TATATGCTTT 780
TATTACCAGT CTCCCCTCAA CAACCCTATT CATCCTCTCA AACCAAGAAA CAACCATTTG 840
GAGTTGACAT TGAATAACAA CCCAAACATT AGACCTAACA CTAAGCTT 888
s monkey
AAGCTTCACC GGCGCAATGA TCCTAATAAT CGCTCACGGG TTTACTTCGT CTATGCTATT 60
CTGCCTAGCA AACTCAAATT ACGAACGAAT TCACAGCCGA ACAATAACAT TTACTCGAGG 120
GCTCCAAACA CTATTCCCGC TTATAGGCCT CTGATGACTC CTAGCAAATC TCGCTAACCT 180
CGCCCTACCA CCAGCTATTA ATCTAGTAGG AGAATTACTC ACAATCGTAT CTTCCTTCTC 240
TTGATCCAAC TTTACTATTA TATTCACAGG ACTTAATATA CTAATTACAG CACTCTACTC 300
ACTTCATATG TATGCCTCTA CACAGCGAGG TCCACTTACA TACAGCACCA GCAATATAAA 360
ACCAATATTT ACACGAGAAA ATACGCTAAT ATTTATACAT ATAACACCAA TCCTCCTCCT 420
TACCTTGAGC CCCAAGGTAA TTATAGGACC CTCACCTTGT AATTATAGTT TAGCAAAACA 480
TTAGATTGTG AATCTAATAA TAGAAGAATA TACTTCTTAA TTACCGAGAA AGTGCGCAAG 540
AACTGCTAAT TCATGCTCCA AGACTAACAA CTTGGCTTCC TCACTTTTAA AGGATAGTAG 600
TTATCCATTG GTCTTAGGAG CCAAAAAATT GGTGCAACTC CAAATAAAAG TAATAATACA 660
CTTCTCCATC ACTCTAATAA CACTAATTAG CCTACTAGCG CCAATCCTAG CTACCCTCAT 720
TAACCCTAAC AAAAGCACAC TATACCCGTA CTACGTAAAA CTAGCCATCA TCTACGCCCT 780
CATTACCAGT ACCTTATCTA TAATATTCTT TATCCTTACA GGCCAAGAAT CAATAATTTC 840
AAACTGACAC TGAATAACTA TCCAAACCAT CAAACTATCC CTAAGCTT 888
tarsier
AAGTTTCATT GGAGCCACCA CTCTTATAAT TGCCCATGGC CTCACCTCCT CCCTATTATT 60
TTGCCTAGCA AATACAAACT ACGAACGAGT CCACAGTCGA ACAATAGCAC TAGCCCGTGG 120
CCTTCAAACC CTATTACCTC TTGCAGCAAC ATGATGACTC CTCGCCAGCT TAACCAACCT 180
GGCCCTTCCC CCAACAATTA ATTTAATCGG TGAACTGTCC GTAATAATAG CAGCATTTTC 240
ATGGTCACAC CTAACTATTA TCTTAGTAGG CCTTAACACC CTTATCACCG CCCTATATTC 300
CCTATATATA CTAATCATAA CTCAACGAGG AAAATACACA TATCATATCA ACAATATCAT 360
GCCCCCTTTC ACCCGAGAAA ATACATTAAT AATCATACAC CTATTTCCCT TAATCCTACT 420
ATCTACCAAC CCCAAACTAA TTATAGGAAC CATGTACTGT AAATATAGTT TAAAAAAACA 480
TTAGATTGTG AGTCTAATAA TAGAAGCCCA AGTTTCTTAT TTACCAAGAA AGTATGCAAG 540
AACTGCTAAC TCATGCCCCA TATATAACAA TGTGGCTTTC TTACTTTTAA AGGATAGAAG 600
TAATCCATCG GTCTTAGGAA CCGAAAAATT GGTGCAACTC CAAATAAAAG TAATATTATT 660
TTCATCCTCC ATTTTACTAT CACTTACACT CTTAATTACC CCATTTATTA TTACAACAAC 720
TAAAAAATAT GAAACACATG CATACCCTTA CTACGTAAAA AACTCTATCG CCTGCGCATT 780
TATAACAAGC CTAGTCCCAA TGCTCATATT TCTATACACA AATCAAGAAA TAATCATTTC 840
CAACTGACAT TGAATAACGA TTCATACTAT GAAATTATGC CTAAGCTT 888
lemur
AAGCTTCATA GGAGCAACCA TTCTAATAAT CGCACATGGC CTTACATCAT CCATATTATT 60
CTGTCTAGCC AACTCTAACT ACGAACGAAT CCATAGCCGT ACAATACTAC TAGCACGAGG 120
GATCCAAACC ATTCTCCCTC TTATAGCCAC CTGATGACTA CTCGCCAGCC TAACTAACCT 180
AGCCCTACCA CCCTCTATCA ATTTAATTGG CGAACTATTC GTCACTATAG CATCCTTCTC 240
ATGATCAAAC ATTACAATTA TCTTAATAGG CTTAAATATG CTCATCACCG CTCTCTATTC 300
CCTCTATATA TTAACTACTA CACAACGAGG AAAACTCACA TATCATTCGC ACAACCTAAA 360
CCCATCCTTT ACACGAGAAA ACACCCTTAT ATCCATACAC ATACTCCCCC TTCTCCTATT 420
TACCTTAAAC CCCAAAATTA TTCTAGGACC CACGTACTGT AAATATAGTT TAAAAAAACA 480
CTAGATTGTG AATCCAGAAA TAGAAGCTCA ACCTTCTTAT TTACCGAGAA AGTATGTATG 540
AACTGCTAAC TCTGCACCCG TATATAAAAA TACGGCTATC TCACTTTTAA AGGATAGAAG 600
TAATCCATTG GCCTTAGGAG CCAAAAAATT GGTGCAACTC CAAATAAAAG TAATACTATT 660
ATCCTCTTTC ACCCTTGTCA CACTGATTAT CCTAACTTTA CCTATCATTA TAAACGTTAC 720
AAACATATAC AAAAACTACC CCTATGCACC ATACGTAAAA TCTTCTATTG CATGTGCCTT 780
CATCACTAGC CTCATCCCAA CTATATTATT TATCTCCTCA GGACAAGAAA CAATCATTTC 840
CAACTGACAT TGAATAACAA TCCAAACCCT AAAACTATCT ATTAGCTT 888
_____________________________________________________________
9 888
_____________________________________________________________
9 888 G
G 4
3
123123123123123123123123123123123123123123123123123123123123
123123123123123123123123123123123123123123123123123123123123
123123123123123123123123123123123123123123123123123123123123
123123123123123123123123123123123123123123123123123123123123
123123123123123123123123123123123123123123123123123123123123
123123123123123123123123123123123123123123123123123123123123
123123123123123123123123123123123123123123123123123123123123
1231231231231231231231231231231231231
444444444444444444444444444444444444444444444444444444444444
444444444444444444444444444444444444444444444444444444444444
444444444444444444444444444444444444444444444444444444444444
44444444444 444
123123123123123123123123123123123123123123123123123123123123
123123123123123123123123123123123123123123123123123123123123
123123123123123123123123123123123123123123123123123123123123
12312312312312312312312312312312312312312312312312312312
_____________________________________________________________
NOTE --
The last three sites in the tRNA segment was misspecified as a codon:
444 was incorrectly specied as 123, so that results for models
involving "C" in Yang (1995. A space-time process model for the
evolution of DNA sequences. Genetics 139: 993-1005) were inaccurate.