ID A0A171_PYRHR Unreviewed; 472 AA.
AC A0A171;
DT 05-APR-2011, integrated into UniProtKB/TrEMBL.
DT 05-APR-2011, sequence version 1.
DT 06-MAR-2013, entry version 14.
DE SubName: Full=Glutamate synthase small subunit-like protein 1;
GN Name=gltY;
OS Pyrococcus horikoshii.
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=53953;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RX PubMed=20630732; DOI=10.1016/j.micres.2010.03.006;
RA Dincturk H.B., Cunin R., Akce H.;
RT "Expression and functional analysis of glutamate synthase small
RT subunit-like proteins from archaeon Pyrococcus horikoshii.";
RL Microbiol. Res. 166:294-303(2011).
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DR EMBL; DQ991102; ABJ90457.1; -; Genomic_DNA.
DR PIR; D71076; D71076.
DR ProteinModelPortal; A0A171; -.
DR GO; GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
DR GO; GO:0051536; F:iron-sulfur cluster binding; IEA:InterPro.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:InterPro.
DR Gene3D; 1.10.1060.10; -; 1.
DR InterPro; IPR013027; FAD_pyr_nucl-diS_OxRdtase.
DR InterPro; IPR012285; Fum_reductase_C.
DR InterPro; IPR006004; Glut_synth_NADPH.
DR InterPro; IPR009051; Helical_ferredxn.
DR InterPro; IPR023753; Pyr_nucl-diS_OxRdtase_FAD/NAD.
DR InterPro; IPR001327; Pyr_OxRdtase_NAD-bd_dom.
DR Pfam; PF00070; Pyr_redox; 2.
DR Pfam; PF07992; Pyr_redox_2; 2.
DR PRINTS; PR00368; FADPNR.
DR SUPFAM; SSF46548; Helical_ferredxn; 1.
DR TIGRFAMs; TIGR01316; gltA; 1.
PE 4: Predicted;
SQ SEQUENCE 472 AA; 51932 MW; C444BEF5DB69F2CD CRC64;
MPKLIKERVP TPERPVEERI KDFKEVNLGY TFELAKKEAE RCLQCPPEYA PCIKGCPVHI
NIPAFIAKIK EGDIKGALRI IWNDNTLPAI TGRVCPQEDQ CEGACVVGKV GDPVNIGKLE
RFVADYAREH GIEEELLREF TEKCDGSKGK VAVVGAGPAG LTCAGELAKM GYKVTIFEAL
HKPGGVLAYG IPEFRLPKEI LDHELKKLKM LGVEIRTDHV VGKTVTLDEL LQEYDAVFIG
TGAGTPKLLN IPGILLDRIY SANEFLTRIN LMKAYEFPEY DTPIAVGKKV IVIGAGNTAM
DAARSALRLG AEVTIAYRRG REDMTAREEE IKHAEEEGVK FEFFLQPVEF IGDENGRVKA
VKFERTKPLE ERDSKGKRKI VGTGEYVTLE ADTVIIAIGL EPNKIITEDG RLKTNPDGTI
VVDENLMTSI PGVFAGGDAI RGEATVILAM GDGKRAAKAI DEYIRRKRGQ NS
//
ID A0AQI4_9ARCH Unreviewed; 206 AA.
AC A0AQI4;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 29-MAY-2013, entry version 14.
DE SubName: Full=Putative ammonia monooxygenase;
DE Flags: Fragment;
GN Name=amoA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Krieger B.U.;
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE.
RX PubMed=18093145; DOI=10.1111/j.1574-6941.2007.00418.x;
RA Foesel B.U., Gieseke A., Schwermer C., Stief P., Koch L., Cytryn E.,
RA de la Torre J.T., van Rijn J., Minz D., Drake H.L., Schramm A.;
RT "Nitrosomonas Nm143-like ammonia oxidizers and Nitrospira marina-like
RT nitrite oxidizers dominate the nitrifier community in a marine
RT aquaculture biofilm.";
RL FEMS Microbiol. Ecol. 63:192-204(2008).
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DR EMBL; AM295170; CAL29415.1; -; Genomic_DNA.
DR GO; GO:0004497; F:monooxygenase activity; IEA:UniProtKB-KW.
DR Gene3D; 1.20.1450.10; -; 1.
DR InterPro; IPR024656; AmoA_arc.
DR InterPro; IPR003393; NH3_CH4_mOase_A.
DR Pfam; PF12942; Archaeal_AmoA; 1.
PE 4: Predicted;
KW Monooxygenase; Oxidoreductase.
FT NON_TER 1 1
FT NON_TER 206 206
SQ SEQUENCE 206 AA; 22937 MW; B05A5FD7E5B70D8F CRC64;
VWLRRCTHYL FIVVVAVNST LLTINAGDYI FYTDWAWTSY TVFSISQTLM LIVGATYYLT
FTGVPGTATY YALIMTVYTW IAKAAWFSLG YPYDFIVTPV WLPSAMLLDL VYWATKKNKH
SLILFGGVLV GMSLPLSNMV NLITVADPLE TAFKYPRPTL PPYMTPIEPQ VGKFYNSPVA
LGAGAGAVLG CTFAALGCKL NTWTYR
//
ID A0AQI5_9ARCH Unreviewed; 206 AA.
AC A0AQI5;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 29-MAY-2013, entry version 14.
DE SubName: Full=Putative ammonia monooxygenase;
DE Flags: Fragment;
GN Name=amoA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Krieger B.U.;
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE.
RX PubMed=18093145; DOI=10.1111/j.1574-6941.2007.00418.x;
RA Foesel B.U., Gieseke A., Schwermer C., Stief P., Koch L., Cytryn E.,
RA de la Torre J.T., van Rijn J., Minz D., Drake H.L., Schramm A.;
RT "Nitrosomonas Nm143-like ammonia oxidizers and Nitrospira marina-like
RT nitrite oxidizers dominate the nitrifier community in a marine
RT aquaculture biofilm.";
RL FEMS Microbiol. Ecol. 63:192-204(2008).
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DR EMBL; AM295171; CAL29416.1; -; Genomic_DNA.
DR EMBL; AM295172; CAL29417.1; -; Genomic_DNA.
DR GO; GO:0004497; F:monooxygenase activity; IEA:UniProtKB-KW.
DR Gene3D; 1.20.1450.10; -; 1.
DR InterPro; IPR024656; AmoA_arc.
DR InterPro; IPR003393; NH3_CH4_mOase_A.
DR Pfam; PF12942; Archaeal_AmoA; 1.
PE 4: Predicted;
KW Monooxygenase; Oxidoreductase.
FT NON_TER 1 1
FT NON_TER 206 206
SQ SEQUENCE 206 AA; 22997 MW; A04B5ED7E5AB61FF CRC64;
VWLRRCTHYL FIVVVAVNST LLTINAGDYI FYTDWAWTSY TVFSISQTLM LIVGATYYLT
FTGVPGTATY YALIMTVYTW IAKAAWFSLG YPYDFIVTPV WLPSAMLLDL VYWATKKNKH
SLILFGGVLV GMSLPLFNMV NLITVADPLE TAFKYPRPTL PPYMTPIEPQ VGKFYNSPVA
LGAGAGAVLG CTFAALGCKL NTWTYR
//
ID A0AQI7_9ARCH Unreviewed; 206 AA.
AC A0AQI7;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 29-MAY-2013, entry version 14.
DE SubName: Full=Putative ammonia monooxygenase;
DE Flags: Fragment;
GN Name=amoA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Krieger B.U.;
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE.
RX PubMed=18093145; DOI=10.1111/j.1574-6941.2007.00418.x;
RA Foesel B.U., Gieseke A., Schwermer C., Stief P., Koch L., Cytryn E.,
RA de la Torre J.T., van Rijn J., Minz D., Drake H.L., Schramm A.;
RT "Nitrosomonas Nm143-like ammonia oxidizers and Nitrospira marina-like
RT nitrite oxidizers dominate the nitrifier community in a marine
RT aquaculture biofilm.";
RL FEMS Microbiol. Ecol. 63:192-204(2008).
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DR EMBL; AM295173; CAL29418.1; -; Genomic_DNA.
DR GO; GO:0004497; F:monooxygenase activity; IEA:UniProtKB-KW.
DR Gene3D; 1.20.1450.10; -; 1.
DR InterPro; IPR024656; AmoA_arc.
DR InterPro; IPR003393; NH3_CH4_mOase_A.
DR Pfam; PF12942; Archaeal_AmoA; 1.
PE 4: Predicted;
KW Monooxygenase; Oxidoreductase.
FT NON_TER 1 1
FT NON_TER 206 206
SQ SEQUENCE 206 AA; 22969 MW; 224B5ADB17A273EA CRC64;
VWLRRCTHYL FIVVVAVNST LLTINAGDYI FYTDWAWTSY TVFSISQTLM LIVGATYYLT
FTGVPGTATY YAVIMTVYTW IAKAAWFSLG YPYDFIVTPV WLPSAMLLDL VYWATKKNKH
SLILFGGVLV GMSLPLFNMV NLITVADPLE TAFKYPRPTL PPYMTPIEPQ VGKFYNSPVA
LGAGAGAVLG CTFAALGCKL NTWSYR
//
ID A0AQI8_9ARCH Unreviewed; 206 AA.
AC A0AQI8;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 29-MAY-2013, entry version 14.
DE SubName: Full=Putative ammonia monooxygenase;
DE Flags: Fragment;
GN Name=amoA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Krieger B.U.;
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE.
RX PubMed=18093145; DOI=10.1111/j.1574-6941.2007.00418.x;
RA Foesel B.U., Gieseke A., Schwermer C., Stief P., Koch L., Cytryn E.,
RA de la Torre J.T., van Rijn J., Minz D., Drake H.L., Schramm A.;
RT "Nitrosomonas Nm143-like ammonia oxidizers and Nitrospira marina-like
RT nitrite oxidizers dominate the nitrifier community in a marine
RT aquaculture biofilm.";
RL FEMS Microbiol. Ecol. 63:192-204(2008).
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DR EMBL; AM295174; CAL29419.1; -; Genomic_DNA.
DR GO; GO:0004497; F:monooxygenase activity; IEA:UniProtKB-KW.
DR Gene3D; 1.20.1450.10; -; 1.
DR InterPro; IPR024656; AmoA_arc.
DR InterPro; IPR003393; NH3_CH4_mOase_A.
DR Pfam; PF12942; Archaeal_AmoA; 1.
PE 4: Predicted;
KW Monooxygenase; Oxidoreductase.
FT NON_TER 1 1
FT NON_TER 206 206
SQ SEQUENCE 206 AA; 23009 MW; A04B4F27E5AB61FF CRC64;
VWLRRCTHYL FIVVVAVNST LLTINAGDYI FYTDWAWTSY TVFSISQTLM LIVGATYYLT
FTGVPGTATY YALIMTVYTW IAKAAWFSLG YPYDFIVTPV WLPSAMLLDL VYWATKKNKH
SLILFGGVLV GMSLPLFNMV NLITVADPLE TAFKYPRPTL PPYMTPIEPQ VGKFYNSPVA
LGAGAGAVLG CTFAALGCKL NTWIYR
//
ID A0EQA2_9EURY Unreviewed; 159 AA.
AC A0EQA2;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 06-MAR-2013, entry version 4.
DE SubName: Full=Methyl-coenzyme M reductase alpha subunit;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured methanogenic archaeon.
OC Archaea; Euryarchaeota; environmental samples.
OX NCBI_TaxID=198240;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Rastogi G., Shouche Y.S.;
RT "Molecular Phylogenetic Analysis of Methanogens from Cattle Manure.";
RL Submitted (NOV-2005) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DQ275097; ABG23152.1; -; Genomic_DNA.
DR EMBL; DQ275098; ABG23153.1; -; Genomic_DNA.
DR EMBL; DQ275099; ABG23154.1; -; Genomic_DNA.
DR EMBL; DQ275100; ABG23155.1; -; Genomic_DNA.
DR EMBL; DQ275102; ABG23157.1; -; Genomic_DNA.
DR EMBL; DQ275104; ABG23159.1; -; Genomic_DNA.
DR EMBL; DQ275105; ABG23160.1; -; Genomic_DNA.
DR EMBL; DQ275106; ABG23161.1; -; Genomic_DNA.
DR EMBL; DQ275112; ABG23166.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 159 159
SQ SEQUENCE 159 AA; 17630 MW; 2B133791DC959BEA CRC64;
VGFTQYATAA YTDNVLDDFT YYGMDYIHDK YKIDVKNPTP KDKVKATQDI VNDIATEVNL
YGMEQYEQFP TMMEDHFGGS QRAAVLAAAS GISTSIATGN SNAGLNGWYL SMLLHKDGWS
RLGFFGYDLQ DQCGSANSLS IRPDEGCIGE FRGPNYPNY
//
ID A0FGX9_9ARCH Unreviewed; 144 AA.
AC A0FGX9;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 13.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DQ994833; ABJ97467.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 144 144
SQ SEQUENCE 144 AA; 15566 MW; F8802E164C671E44 CRC64;
AYTDDILDDN VYYDVDYIND KYNGAATIGK DNKVKATLEV VKDIATESTI YGIETYEKFP
TALEDHFGGS QRATVLAAAA GVACALGTAN ANAGLSGWYL SMYVHKEAWG RLGFFGYDLQ
DQCGATNVLS YQGDEGLPDE LRGP
//
ID A0FGY0_9ARCH Unreviewed; 136 AA.
AC A0FGY0;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 13.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DQ994834; ABJ97468.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 136 136
SQ SEQUENCE 136 AA; 14775 MW; 63B4A0156B0E9E24 CRC64;
AYADDILDDF VYYGMEYVDD KYGICGTKAS TEVVHDISAE VTMYGLEQYE YPALLEDHFG
GSQRAAVVSA AAGCSVAFAT GNSNAGINGW YLSQILHKEA HSRLGFYGYD LQDQCGASNS
LSIRSDEGLI HELRGP
//
ID A0FGY1_9ARCH Unreviewed; 144 AA.
AC A0FGY1;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 14.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DQ994835; ABJ97469.1; -; Genomic_DNA.
DR EMBL; DQ994839; ABJ97473.1; -; Genomic_DNA.
DR EMBL; DQ994873; ABJ97507.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 144 144
SQ SEQUENCE 144 AA; 15549 MW; 97E88C08BD80BC42 CRC64;
AYTDDILDNN VYYDVDYIND KYNGAATIGK DNKVKATLEV VKDIATESTI YGIETYEKFP
TALEDHFGGS QRATVLAAAA GVACALGTAN ANAGLSGWYL SMYVHKEAWG RLGFFGFDLQ
DQCGATNVLS YQGDEGLPDE LRGP
//
ID A0FGY2_9ARCH Unreviewed; 144 AA.
AC A0FGY2;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 14.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DQ994836; ABJ97470.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 144 144
SQ SEQUENCE 144 AA; 15621 MW; E67F16E89ABB0B94 CRC64;
AYTDDILDNN VYYNIDYIND KYNGAANVGK DNKVKATLDV VKDIATESTL YGIETYEKFP
TALEDHFGGS QRATVLAAAA GVCTAIATAN ANAGLSGWYL SMYLHKEAWG RLGFFGYDLQ
DQCGATNVLS YQGDEGLPDE LRGP
//
ID A0FGY3_9ARCH Unreviewed; 138 AA.
AC A0FGY3;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 15.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DQ994837; ABJ97471.1; -; Genomic_DNA.
DR EMBL; DQ994849; ABJ97483.1; -; Genomic_DNA.
DR EMBL; DQ994855; ABJ97489.1; -; Genomic_DNA.
DR EMBL; DQ994862; ABJ97496.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 138 138
SQ SEQUENCE 138 AA; 14954 MW; 2268A0C82946535C CRC64;
AYTNDVLDDF CYYGVDFAND KFGGFAKAPK LLDTAKELAT EVNAYGMEQY EAYPTLLEDH
FGGSQRASVL AAASGITSAI ASGHSQVGLA GWYLSMLLHK EGWGRLGFFG YDLQDQCGPT
NVFSYQSDEG NPLELRGA
//
ID A0FGY4_9ARCH Unreviewed; 144 AA.
AC A0FGY4;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 14.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DQ994838; ABJ97472.1; -; Genomic_DNA.
DR EMBL; DQ994883; ABJ97517.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 144 144
SQ SEQUENCE 144 AA; 15606 MW; 2DBA03DB557E0A83 CRC64;
AYTDDILDNN VYYDVDYIND KYNGAANVGK DNKVKATLEV VKDIATESTI YGIETYEKFP
TALEDHFGGS QRATVLAAAA GVSTAIATAN ANAGLSGWYL SMYLHKEAWG RLGFFGYDLQ
DQCGATNVLS YQGDEGLPDE LRGP
//
ID A0FGY6_9ARCH Unreviewed; 136 AA.
AC A0FGY6;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 14.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DQ994840; ABJ97474.1; -; Genomic_DNA.
DR EMBL; DQ994841; ABJ97475.1; -; Genomic_DNA.
DR EMBL; DQ994843; ABJ97477.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 136 136
SQ SEQUENCE 136 AA; 14847 MW; 469BEF5E83EA9146 CRC64;
AYTDDILDDF LYYGMEYVDD KYGICGTKAT TEVVHDIAAE VTMYGLEQYE YPALLEDHFG
GSQRAAVVSA AAGCSVAFAT GNSNAGINGW YLSQILHKET HSRLGFYGYD LQDQCGASNS
LSIRSDEGLI HELRGP
//
ID A0FGY8_9ARCH Unreviewed; 144 AA.
AC A0FGY8;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 13.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DQ994842; ABJ97476.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 144 144
SQ SEQUENCE 144 AA; 15505 MW; 96A52FCBBC90A812 CRC64;
AYTDDILDNN VYYDVDYIND KYNGAATIGK DNKVKATLDV VKDIATESTI YGIETYEKFP
TALEDHFGGS QRATVLAAAA GVACALGTAN ANAGLSGWYL SMYLHKEAWG RLGFFGCDLQ
DQCGATNVLS YQGDEGLPDE LRGP
//
ID A0FGZ0_9ARCH Unreviewed; 144 AA.
AC A0FGZ0;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 15.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DQ994844; ABJ97478.1; -; Genomic_DNA.
DR EMBL; DQ994850; ABJ97484.1; -; Genomic_DNA.
DR EMBL; DQ994851; ABJ97485.1; -; Genomic_DNA.
DR EMBL; DQ994869; ABJ97503.1; -; Genomic_DNA.
DR EMBL; DQ994872; ABJ97506.1; -; Genomic_DNA.
DR EMBL; DQ994877; ABJ97511.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 144 144
SQ SEQUENCE 144 AA; 15619 MW; E612368BCB9E0A91 CRC64;
AYTDDILDNN VYYNIDYIND KYNGAANVGK DNKVKATLEV VKDIATESTI YGIETYEKFP
TALEDHFGGS QRATVLAAAA GVSTAIATAN ANAGLSGWYL SMYLHKEAWG RLGFFGYDLQ
DQCGATNVLS YQGDEGLPDE LRGP
//
ID A0FGZ1_9ARCH Unreviewed; 136 AA.
AC A0FGZ1;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 13.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DQ994845; ABJ97479.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 136 136
SQ SEQUENCE 136 AA; 14683 MW; D756F0828E1D086A CRC64;
AYTDDILDDF LYYGMEYVDG KYGICGTKAT TEVVHDIAAE VTMYGLEQYD TPALLEDHFG
GSQRAAVVSA AAGCSVAFAT GNSNAGINGW YLSQILHKEA HSRLGFYGYD LQDQCGASNS
LSIRSDEGLI HELRGP
//
ID A0FGZ2_9ARCH Unreviewed; 136 AA.
AC A0FGZ2;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 12.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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CC -----------------------------------------------------------------------
DR EMBL; DQ994846; ABJ97480.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 136 136
SQ SEQUENCE 136 AA; 14890 MW; 4682E840CF17D0B6 CRC64;
AYTDDILDDF LYYGMEYVDD KYGICGTKAT TEVVHDIAAE VTMYGLEQYE YPALLEDHFG
GSQRAAVVSA AAGCSVAXXT GNSNXGINGW YLXQILHKET XSRLGFYGYD LQDQCGASNS
LSIRSDEGLI HELRGP
//
ID A0FGZ3_9ARCH Unreviewed; 144 AA.
AC A0FGZ3;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 13.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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CC -----------------------------------------------------------------------
DR EMBL; DQ994847; ABJ97481.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 144 144
SQ SEQUENCE 144 AA; 15565 MW; 91A25FA71D5AAD47 CRC64;
AYTDDILDNN VYYDVDYIND KYNGAATIGK DNKVKATLDV VKDIATESTL YGIETYEKFP
TALEDHFGGS QRATVLAAAA GVACALGTAN ANAGLSGWYL SMYLHKEAWG RLGFFGYDLQ
DQCGATNVLS YQGDEGLPDE LRGP
//
ID A0FGZ4_9ARCH Unreviewed; 138 AA.
AC A0FGZ4;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 15.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DQ994848; ABJ97482.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 138 138
SQ SEQUENCE 138 AA; 15197 MW; B85D6DE85ED1F7B8 CRC64;
AYTDNVLDDF TYYGKDYVED KYGGLTEAPN NMDTVLDVGT EVAFYALEQY EEYPALLETH
FGGSQRASVI SAAAGCSTAF ATGNAQTGLS AWYLSMYLHK EQHSRLGFYG FDLQDQCGAA
NVFSIRNDEG LPLEMRGP
//
ID A0FGZ8_9ARCH Unreviewed; 137 AA.
AC A0FGZ8;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 14.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DQ994852; ABJ97486.1; -; Genomic_DNA.
DR EMBL; DQ994859; ABJ97493.1; -; Genomic_DNA.
DR EMBL; DQ994867; ABJ97501.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 137 137
SQ SEQUENCE 137 AA; 15057 MW; A15C10D5FB7437C4 CRC64;
AYTDNVLDDF TYFGKEYVED KFGITEAPNT MDTVLDVASE VTFYALEQFE DYPALLETIF
GGSQRASIVA AAAGCSTAFA TGNAQTGLSG WYLSMYLHKE QHSRLGFYGY DLQDQCGASN
VFSIRNDEGL PTELRGP
//
ID A0FGZ9_9ARCH Unreviewed; 138 AA.
AC A0FGZ9;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 14.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DQ994853; ABJ97487.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 138 138
SQ SEQUENCE 138 AA; 15068 MW; 185E0F812B03A02D CRC64;
AYTDNVLDDF TYYGKDYVED KXGGLTEAPN NMDTVLDVGT EVAFYALEQY EEYPALLETH
FGGSQRASVI SAAAGASTAF ATGNAQTGLS AWYLXMYLHK EXHSRLGFXG FDLQDQCGAA
NVFSIRNDEG LPLEMRGP
//
ID A0FH00_9ARCH Unreviewed; 138 AA.
AC A0FH00;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 13.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DQ994854; ABJ97488.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 138 138
SQ SEQUENCE 138 AA; 15185 MW; 2D4C3CB6DC4B8ABC CRC64;
AYTDNVLDDF TYYGKDYVED KYGDLCSAPN NMDTVLDVGT EVAFYALEQY EEYPALLETH
FGGSQRASVV SAAAGCSTAF ATGNAQTGLS AWYLAMYLHK EQHSRLGFYG FDLQDQCGAA
NVFSIRNDEG LPLEMRGP
//
ID A0FH02_9ARCH Unreviewed; 138 AA.
AC A0FH02;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 13.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DQ994856; ABJ97490.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 138 138
SQ SEQUENCE 138 AA; 15067 MW; 4124701AAC579BF8 CRC64;
AYTDNVLDDF TYYGKDYVED KYGDLCSAPN NMDTVPDVGT EVAFYALEQY EEYPALLEAH
FGGSQRASVV SAAAGCSTAF ATGNAQTGLS AWYLAMYLHK EQHSRLGFYG FDLQDQCGAA
NVFSIRNDGG LPLEMRGP
//
ID A0FH03_9ARCH Unreviewed; 138 AA.
AC A0FH03;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 06-MAR-2013, entry version 15.
DE SubName: Full=Methyl coenzyme M reductase;
DE Flags: Fragment;
GN Name=mcrA;
OS uncultured archaeon.
OC Archaea; environmental samples.
OX NCBI_TaxID=115547;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RA Gattinger A., Radl V., Chronakova A., Nemcova A., Cuhel J., Simek M.,
RA Schloter M., Elthova D.;
RT "Outdoor cattle husbandry influences abundance and activity of
RT methanogenic archaea in an upland pasture soil.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DQ994857; ABJ97491.1; -; Genomic_DNA.
DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA:InterPro.
DR GO; GO:0015948; P:methanogenesis; IEA:InterPro.
DR Gene3D; 1.20.840.10; -; 1.
DR InterPro; IPR022681; MCR_a/b_chain_a-bundle.
DR InterPro; IPR008924; Me_CoM_Rdtase_asu/bsu_C.
DR InterPro; IPR009047; Me_CoM_Rdtase_asu_C.
DR Pfam; PF02249; MCR_alpha; 1.
DR SUPFAM; SSF48081; MCR_alpha_beta_C; 1.
PE 4: Predicted;
FT NON_TER 1 1
FT NON_TER 138 138
SQ SEQUENCE 138 AA; 15196 MW; 042414924BD9EBCB CRC64;
PYTDNVLDDF TYYGKDYVED TYGGLTEAPN NMDTVLDVGT EVAFYALEQY EEYPALLETH
FGGSQRASVI SAAAGCSTAF ATGNAQTGLS AWYLSMYLHK EQHSRLGFYG FDLQDQCGAA
NVFSIRNDEG LPLEMRGP
//
ID F8VC58_9EURY Unreviewed; 609 AA.
AC F8VC58; G1FJV2;
DT 21-SEP-2011, integrated into UniProtKB/TrEMBL.
DT 21-SEP-2011, sequence version 1.
DT 06-MAR-2013, entry version 9.
DE RecName: Full=DNA-directed RNA polymerase;
DE EC=2.7.7.6;
OS Salinarchaeum laminariae.
OC Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
OC Halobacteriaceae; Salinarchaeum.
OX NCBI_TaxID=869888;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=R26;
RA Cui H.-L.;
RT "Halophilic archaea isolated from salted kelp.";
RL Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=R22;
RA Cui H.-L.;
RT "Alophilic archaea isolated from salted kelp.";
RL Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate
CC + RNA(n+1).
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
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DR EMBL; JN164655; AEJ33658.1; -; Genomic_DNA.
DR EMBL; JN206649; AEM24819.1; -; Genomic_DNA.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0032549; F:ribonucleoside binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
DR Gene3D; 2.40.270.10; -; 2.
DR Gene3D; 2.40.50.150; -; 1.
DR InterPro; IPR015712; DNA-dir_RNA_pol_su2.
DR InterPro; IPR007120; DNA-dir_RNA_pol_su2_6.
DR InterPro; IPR007121; RNA_pol_bsu_CS.
DR InterPro; IPR007646; RNA_pol_Rpb2_4.
DR InterPro; IPR007647; RNA_pol_Rpb2_5.
DR InterPro; IPR007641; RNA_pol_Rpb2_7.
DR InterPro; IPR014724; RNA_pol_RPB2_OB-fold.
DR InterPro; IPR019969; RNAP_B.
DR PANTHER; PTHR20856; PTHR20856; 1.
DR Pfam; PF04566; RNA_pol_Rpb2_4; 1.
DR Pfam; PF04567; RNA_pol_Rpb2_5; 1.
DR Pfam; PF00562; RNA_pol_Rpb2_6; 1.
DR Pfam; PF04560; RNA_pol_Rpb2_7; 1.
DR TIGRFAMs; TIGR03670; rpoB_arch; 1.
DR PROSITE; PS01166; RNA_POL_BETA; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Nucleotidyltransferase; Transcription;
KW Transferase.
SQ SEQUENCE 609 AA; 67720 MW; 92014A2DDB3435E9 CRC64;
MASQQREAKV YVNGSLVGTH PDPERLAAQV REARRRGEVS EMVNVSVKDR TQEVIINADA
GRARRPLIVV DEGEPLLDDD ELDALEDGDI SFEDLVEAGY VEFIDAEEEE DIFVAVDEEE
LTEDHTHLEI DPQLMFGIGA GMIPYPEHNA SPRITMGAGM IKQSLGLPAA NYRIRPDTRQ
HLLHYPQLSM VKTQTTEQIG YDDRPAAQNF TVAVMSYEGF NIEDALILNQ GSVDRALARS
HFFRTYEGEE RRYPGGQEDH FEIPDQDVRG ARGEEAYTHL DDDGLVNPET QVGENDVLLG
KTSPPRFLEE PDDMGGLSPQ KRRETSVTMR SGESGVVDTV TLMEGEDGSK LSKVSVRDER
IPEMGDKFAS RHGQKGVVGH IAPQEDMPFT EDGVVPDLIV NPHALPSRMT VGHILEMIGG
KVGALEGRRV DGTPFLGEDE DELRGSLEDH GFKSSGKEVM YSGVTGEKID AEIFVGCIFY
QKLYHMVSNK IHARSRGPVQ VLTRQPTEGR AREGGLRIGE MERDVFIGHG AAMTLKERLL
DESDREFIPI CAQCGMAAVE NVEQRRVYCP NCDEETDIHD IEMSYAFKLL LDEMKALGIA
PRLELEDAV
//