NAME
Term::DNAColor - Add colors to DNA and RNA sequences in terminal output
VERSION
version 0.110460
SYNOPSIS
use Term::DNAColor;
print colordna("ATCGGTCNNNTAGCTGAN"), "\n";
DESCRIPTION
This module provides a function, "colordna", that takes a DNA sequence
and wraps unambiguous nucleotides in ANSI color codes, so that you can
print the sequence to a terminal and have it come out colored.
FUNCTIONS
colordna
Takes a string representing a DNA sequence and adds ANSI color codes to
the following nucleotides:
* A: green
* T: red
* C: blue
* G: yellow
U is colorized like T, to accomodate RNA sequences.
In addition, the entire sequence is rendered in bold.
This function is exported by default.
colorrna
This is simply an alias for "colordna". Both "colordna" and "colorrna"
will highlight U for uracil. Unlike "colordna", it is not exported by
default, but only by request.
BUGS AND LIMITATIONS
Colors are not configurable.
Please report any bugs or feature requests to
"rct+perlbug@thompsonclan.org".
SEE ALSO
* Term::ANSIColor - Provides the ANSI color codes for this module
INSTALLATION
See perlmodinstall for information and options on installing Perl
modules.
AUTHOR
Ryan C. Thompson <rct@thompsonclan.org>
COPYRIGHT AND LICENSE
This software is copyright (c) 2011 by Ryan C. Thompson.
This is free software; you can redistribute it and/or modify it under
the same terms as the Perl 5 programming language system itself.
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