Source Name Material Type Term Source REF Characteristics [Genotype] Characteristics[Organism] Term Source REF Characteristics[BioSourceType] Term Source REF Characteristics[CellType] Term Source REF Characteristics[CellLine] Protocol REF Parameter Value [media] Sample Name Protocol REF Parameter Value [Input RNA] Unit [MassUnit] Term Source REF Parameter Value [Extracted Product] Term Source REF Parameter Value [Amplification] Extract Name Protocol REF Term Source REF Labeled Extract Name Label Protocol REF:Affymetrix:Protocol: Hybridization Name Array Design REF Term Source REF Protocol REF:Affymetrix:Protocol: Scan Name Array Data File Comment[EXP] Protocol REF Normalization Name Derived Array Data File Factor Value [EF1](genotype) Normalization Name Derived Array Data Matrix File Comment[CDF]
TK6 replicate 1 cell MO wild_type Homo sapiens ncbitax fresh_sample MO B_lymphoblast CTO TK6 GROWTHPRTCL10653 RPMI 1640 medium supplemented with 10% horse serum TK6 replicate 1 EXTPRTCL10654 5 ug MO total RNA MO none TK6 replicate 1 P-AFFY-2 ArrayExpress TK6 replicate 1 biotin H_TK6 replicate 1 A-AFFY-44 ArrayExpress TK6 replicate 1 Data1.CEL Data1.EXP TK6 replicate 1 Data1.CHP wild_type combined data affy_dm.txt HG-U133A_Plus_2.CDF
TK6 replicate 2 cell MO wild_type Homo sapiens ncbitax fresh_sample MO B_lymphoblast CTO TK6 GROWTHPRTCL10653 RPMI 1640 medium supplemented with 10% horse serum TK6 replicate 2 EXTPRTCL10654 5 ug MO total RNA MO none TK6 replicate 2 P-AFFY-2 ArrayExpress TK6 replicate 2 biotin H_TK6 replicate 2 A-AFFY-44 ArrayExpress TK6 replicate 2 Data2.CEL Data2.EXP TK6 replicate 2 Data2.CHP wild_type combined data affy_dm.txt HG-U133A_Plus_2.CDF
TK6MDR1 replicate 1 cell MO SF91m3 oncoretrovirus Homo sapiens ncbitax fresh_sample MO B_lymphoblast CTO TK6 GROWTHPRTCL10653 RPMI 1640 medium supplemented with 10% horse serum TK6MDR1 replicate 1 EXTPRTCL10654 5 mg MO total RNA MO none TK6MDR1 replicate 1 P-AFFY-2 ArrayExpress TK6MDR1 replicate 1 biotin Hybridization-EukGE-WS2v5 H_TK6MDR1 replicate 1 A-AFFY-44 ArrayExpress Scan TK6MDR1 replicate 1 Data3.CEL Data3.EXP TRANPRTCL10656 TK6MDR1 replicate 1 Data3.CHP SF91m3 oncoretrovirus combined data affy_dm.txt HG-U133A_Plus_2.CDF
TK6MDR1 replicate 2 cell MO SF91m3 oncoretrovirus Homo sapiens ncbitax fresh_sample MO B_lymphoblast CTO TK6 GROWTHPRTCL10653 RPMI 1640 medium supplemented with 10% horse serum TK6MDR1 replicate 2 EXTPRTCL10654 5 mg MO total RNA MO none TK6MDR1 replicate 2 P-AFFY-2 ArrayExpress TK6MDR1 replicate 2 biotin Hybridization-EukGE-WS2v5 H_TK6MDR1 replicate 2 A-AFFY-44 ArrayExpress Scan TK6MDR1 replicate 2 Data4.CEL Data4.EXP TRANPRTCL10656 TK6MDR1 replicate 2 Data4.CHP SF91m3 oncoretrovirus combined data affy_dm.txt HG-U133A_Plus_2.CDF