NAME
Bio::KEGGI
Bio::KEGG
These two modules are used to parse KEGG (http://www.genome.jp) files.
Now there are three file suppoirted:
genome: ftp://ftp.genome.jp/pub/kegg/genes/genome
ko: ftp://ftp.genome.jp/pub/kegg/genes/ko
pathway: ftp://ftp.genome.jp/pub/kegg/pathway/pathway
and KEGG organism gene entries, such as:
ftp://ftp.genome.jp/pub/kegg/genes/organisms/aac/A.acidocaldarius.ent
For more information, refer to the documentation for Bio::KEGGI and
Bio::KEGG.
If you would like to parse KEGG sequence file, please see
Bio::SeqIO::kegg module.
AUTHORS
Haizhou Liu, "<zeroliu@gmail.com>"
INSTALLATION
To install this module, run the following commands:
perl Makefile.PL
make
make test
make install
SUPPORT AND DOCUMENTATION
After installing, you can find documentation for this module with the
perldoc command.
perldoc Bio::KEGGI
You can also look for information at:
RT, CPAN's request tracker
http://rt.cpan.org/NoAuth/Bugs.html?Dist=Bio-KEGGI
AnnoCPAN, Annotated CPAN documentation
http://annocpan.org/dist/Bio-KEGGI
CPAN Ratings
http://cpanratings.perl.org/d/Bio-KEGGI
Search CPAN
http://search.cpan.org/dist/Bio-KEGGI/
LICENSE AND COPYRIGHT
Copyright (C) 2011 Haizhou Liu
All Rights Reserved.
This program is free software; you can redistribute it and/or modify it
under the same terms as Perl itself.