BioX-Workflow-Command

Changes for version 2.3.2 - 2018-01-10

Added inspect command
Pinned some versions of modules (MooseX::App, Test::Exception)

Modules

BioX::Workflow::Command

Opinionated Bioinformatics Genomics Workflow Creator

BioX::Workflow::Command::run::Rules::Rules

BioX::Workflow::Command::run::Utils::Attributes

Provides

BioX::Workflow::Command::Exceptions

in lib/BioX/Workflow/Command/Exceptions.pm

BioX::Workflow::Command::Utils::Create

in lib/BioX/Workflow/Command/Utils/Create.pm

BioX::Workflow::Command::Utils::Files

in lib/BioX/Workflow/Command/Utils/Files.pm

BioX::Workflow::Command::Utils::Log

in lib/BioX/Workflow/Command/Utils/Log.pm

BioX::Workflow::Command::add

in lib/BioX/Workflow/Command/add.pm

BioX::Workflow::Command::inspect

in lib/BioX/Workflow/Command/inspect.pm

BioX::Workflow::Command::inspect::Exceptions::Path

in lib/BioX/Workflow/Command/inspect/Exceptions/Path.pm

BioX::Workflow::Command::inspect::Utils::ParsePlainText

in lib/BioX/Workflow/Command/inspect/Utils/ParsePlainText.pm

BioX::Workflow::Command::new

in lib/BioX/Workflow/Command/new.pm

BioX::Workflow::Command::run

in lib/BioX/Workflow/Command/run.pm

BioX::Workflow::Command::run::Rules::Directives

in lib/BioX/Workflow/Command/run/Rules/Directives.pm

BioX::Workflow::Command::run::Rules::Directives::Exceptions::DidNotDeclare

in lib/BioX/Workflow/Command/run/Rules/Directives/Exceptions/DidNotDeclare.pm

BioX::Workflow::Command::run::Rules::Directives::Exceptions::SyntaxError

in lib/BioX/Workflow/Command/run/Rules/Directives/Exceptions/SyntaxError.pm

BioX::Workflow::Command::run::Rules::Directives::Functions

in lib/BioX/Workflow/Command/run/Rules/Directives/Functions.pm

BioX::Workflow::Command::run::Rules::Directives::Inspect

in lib/BioX/Workflow/Command/run/Rules/Directives/Inspect.pm

BioX::Workflow::Command::run::Rules::Directives::Interpolate

in lib/BioX/Workflow/Command/run/Rules/Directives/Interpolate.pm

BioX::Workflow::Command::run::Rules::Directives::Interpolate::Mustache

in lib/BioX/Workflow/Command/run/Rules/Directives/Interpolate/Mustache.pm

BioX::Workflow::Command::run::Rules::Directives::Interpolate::Text

in lib/BioX/Workflow/Command/run/Rules/Directives/Interpolate/Text.pm

BioX::Workflow::Command::run::Rules::Directives::Sample

in lib/BioX/Workflow/Command/run/Rules/Directives/Sample.pm

BioX::Workflow::Command::run::Rules::Directives::Types::Array

in lib/BioX/Workflow/Command/run/Rules/Directives/Types/Array.pm

BioX::Workflow::Command::run::Rules::Directives::Types::CSV

in lib/BioX/Workflow/Command/run/Rules/Directives/Types/CSV.pm

BioX::Workflow::Command::run::Rules::Directives::Types::Config

in lib/BioX/Workflow/Command/run/Rules/Directives/Types/Config.pm

BioX::Workflow::Command::run::Rules::Directives::Types::Glob

in lib/BioX/Workflow/Command/run/Rules/Directives/Types/Glob.pm

BioX::Workflow::Command::run::Rules::Directives::Types::HPC

in lib/BioX/Workflow/Command/run/Rules/Directives/Types/HPC.pm

BioX::Workflow::Command::run::Rules::Directives::Types::Hash

in lib/BioX/Workflow/Command/run/Rules/Directives/Types/Hash.pm

BioX::Workflow::Command::run::Rules::Directives::Types::List

in lib/BioX/Workflow/Command/run/Rules/Directives/Types/List.pm

BioX::Workflow::Command::run::Rules::Directives::Types::Mustache

in lib/BioX/Workflow/Command/run/Rules/Directives/Types/Mustache.pm

BioX::Workflow::Command::run::Rules::Directives::Types::Path

in lib/BioX/Workflow/Command/run/Rules/Directives/Types/Path.pm

BioX::Workflow::Command::run::Rules::Directives::Types::Roles::File

in lib/BioX/Workflow/Command/run/Rules/Directives/Types/Roles/File.pm

BioX::Workflow::Command::run::Rules::Directives::Types::Stash

in lib/BioX/Workflow/Command/run/Rules/Directives/Types/Stash.pm

BioX::Workflow::Command::run::Rules::Directives::Walk

in lib/BioX/Workflow/Command/run/Rules/Directives/Walk.pm

BioX::Workflow::Command::run::Rules::Exceptions::KeyDeclaration

in lib/BioX/Workflow/Command/run/Rules/Exceptions/KeyDeclaration.pm

BioX::Workflow::Command::run::Rules::Exceptions::OneRuleName

in lib/BioX/Workflow/Command/run/Rules/Exceptions/OneRuleName.pm

BioX::Workflow::Command::run::Utils::Debug

in lib/BioX/Workflow/Command/run/Utils/Debug.pm

BioX::Workflow::Command::run::Utils::Files::ResolveDeps

in lib/BioX/Workflow/Command/run/Utils/Files/ResolveDeps.pm

BioX::Workflow::Command::run::Utils::Files::TrackChanges

in lib/BioX/Workflow/Command/run/Utils/Files/TrackChanges.pm

BioX::Workflow::Command::run::Utils::Samples

in lib/BioX/Workflow/Command/run/Utils/Samples.pm

BioX::Workflow::Command::run::Utils::WriteMeta

in lib/BioX/Workflow/Command/run/Utils/WriteMeta.pm

BioX::Workflow::Command::stats

in lib/BioX/Workflow/Command/stats.pm

BioX::Workflow::Command::validate

in lib/BioX/Workflow/Command/validate.pm

Other files

To install BioX::Workflow::Command, copy and paste the appropriate command in to your terminal.

cpanm

cpanm BioX::Workflow::Command

CPAN shell

perl -MCPAN -e shell
install BioX::Workflow::Command

For more information on module installation, please visit the detailed CPAN module installation guide.

	Global
`s`	Focus search bar
`?`	Bring up this help dialog

	GitHub
`g` `p`	Go to pull requests
`g` `i`	go to github issues (only if github is preferred repository)

	POD
`g` `a`	Go to author
`g` `c`	Go to changes
`g` `i`	Go to issues
`g` `d`	Go to dist
`g` `r`	Go to repository/SCM
`g` `s`	Go to source
`g` `b`	Go to file browse

	Search terms
module: (e.g. module:Plugin)
distribution: (e.g. distribution:Dancer auth)
author: (e.g. author:SONGMU Redis)
version: (e.g. version:1.00)

Changes for version 2.3.2 - 2018-01-10

Modules

Provides

Other files

Module Install Instructions