Bio::PanGenome::AnnotateGroups - Take in a group file and assosiated GFF files for the isolates and update the group name to the gene name
version 1.133090
Take in a group file and assosiated GFF files for the isolates and update the group name to the gene name use Bio::PanGenome::AnnotateGroups;
my $obj = Bio::PanGenome::AnnotateGroups->new( gff_files => ['abc.gff','efg.gff'], output_filename => 'example_output.fa', groups_filename => 'groupsfile', ); $obj->reannotate;
Andrew J. Page <ap13@sanger.ac.uk>
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
To install Bio::PanGenome, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::PanGenome
CPAN shell
perl -MCPAN -e shell install Bio::PanGenome
For more information on module installation, please visit the detailed CPAN module installation guide.