bp_parse_hmmsearch - parse single/multiple HMMSEARCH results file(s) with different output options
bp_parse_hmmsearch [--po] [--ps] -s hmmsearch_file
bp_parse_hmmsearch [--po] [--ps] -m index_file
-s HMMSEARCH file to parse. -m INDEX file that contains a list of HMMSEARCH files for multiple parsing.
--po Print only the hits that have positive scores. --ps Print the total of positive scores found. --help Show this documentation.
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:
https://github.com/bioperl/bioperl-live/issues
Mauricio Herrera Cuadra <mauricio at open-bio.org>
To install Bio::Seq, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::Seq
CPAN shell
perl -MCPAN -e shell install Bio::Seq
For more information on module installation, please visit the detailed CPAN module installation guide.