
Bio::DB::BioSQL::Oracle::PathAdaptorDriver - DESCRIPTION of Object

Give standard usage here

Describe the object here

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:
http://bugzilla.open-bio.org/

Email hlapp at gmx.net

Additional contributors names and emails here

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : compute_transitive_closure
Usage :
Function: Compute the transitive closure over a given ontology
and populate the respective path table in the relational
schema.
Example :
Returns : TRUE on success, and FALSE otherwise
Args : The calling adaptor.
The ontology to compute the transitive closure over (a
persistent Bio::Ontology::OntologyI compliant object).
The predicate indicating identity between a term and
itself, to be used as the predicate for the paths of
distance zero between a term and itself. If undef the zero
distance paths will not be created.
A scalar that if evaluating to TRUE means truncate the
paths for the respective ontology first (optional;
even though the default is FALSE this parameter should
usually be given as TRUE unless you know what you are
doing).