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AUTHORS [pod]
Bio/Factory/EMBOSS.pm [pod]
Bio/Installer/Clustalw.pm [pod]
Bio/Installer/EMBOSS.pm [pod]
Bio/Installer/Generic.pm [pod]
Bio/Installer/Muscle.pm [pod]
Bio/Installer/PAML.pm [pod]
Bio/Installer/Probcons.pm [pod]
Bio/Installer/TCoffee.pm [pod]
Bio/Tools/Run/AbstractRunner.pm [pod]
Bio/Tools/Run/Alignment/Amap.pm [pod]
Bio/Tools/Run/Alignment/Blat.pm [pod]
Bio/Tools/Run/Alignment/Clustalw.pm [pod]
Bio/Tools/Run/Alignment/DBA.pm [pod]
Bio/Tools/Run/Alignment/Exonerate.pm [pod]
Bio/Tools/Run/Alignment/Kalign.pm [pod]
Bio/Tools/Run/Alignment/Lagan.pm [pod]
Bio/Tools/Run/Alignment/MAFFT.pm [pod]
Bio/Tools/Run/Alignment/Muscle.pm [pod]
Bio/Tools/Run/Alignment/Probalign.pm [pod]
Bio/Tools/Run/Alignment/Probcons.pm [pod]
Bio/Tools/Run/Alignment/Sim4.pm [pod]
Bio/Tools/Run/Alignment/StandAloneFasta.pm [pod]
Bio/Tools/Run/Alignment/TCoffee.pm [pod]
Bio/Tools/Run/Analysis.pm [pod]
Bio/Tools/Run/Analysis/soap.pm [pod]
Bio/Tools/Run/AnalysisFactory.pm [pod]
Bio/Tools/Run/AnalysisFactory/Pise.pm [pod]
Bio/Tools/Run/AnalysisFactory/soap.pm [pod]
Bio/Tools/Run/Cap3.pm [pod]
Bio/Tools/Run/Coil.pm [pod]
Bio/Tools/Run/EMBOSSacd.pm [pod]
Bio/Tools/Run/EMBOSSApplication.pm [pod]
Bio/Tools/Run/Eponine.pm [pod]
Bio/Tools/Run/FootPrinter.pm [pod]
Bio/Tools/Run/Genewise.pm [pod]
Bio/Tools/Run/Genscan.pm [pod]
Bio/Tools/Run/Hmmer.pm [pod]
Bio/Tools/Run/JavaRunner.pm [pod]
Bio/Tools/Run/Mdust.pm [pod]
Bio/Tools/Run/Phrap.pm [pod]
Bio/Tools/Run/Phylo/Forester/SDI.pm [pod]
Bio/Tools/Run/Phylo/LVB.pm [pod]
Bio/Tools/Run/Phylo/Molphy/ProtML.pm [pod]
Bio/Tools/Run/Phylo/PAML/Baseml.pm [pod]
Bio/Tools/Run/Phylo/PAML/Codeml.pm [pod]
Bio/Tools/Run/Phylo/PAML/Evolver.pm [pod]
Bio/Tools/Run/Phylo/PAML/Yn00.pm [pod]
Bio/Tools/Run/Phylo/Phylip/Base.pm [pod]
Bio/Tools/Run/Phylo/Phylip/Consense.pm [pod]
Bio/Tools/Run/Phylo/Phylip/DrawGram.pm [pod]
Bio/Tools/Run/Phylo/Phylip/DrawTree.pm [pod]
Bio/Tools/Run/Phylo/Phylip/Neighbor.pm [pod]
Bio/Tools/Run/Phylo/Phylip/PhylipConf.pm [pod]
Bio/Tools/Run/Phylo/Phylip/ProtDist.pm [pod]
Bio/Tools/Run/Phylo/Phylip/ProtPars.pm [pod]
Bio/Tools/Run/Phylo/Phylip/SeqBoot.pm [pod]
Bio/Tools/Run/PiseApplication.pm [pod]
Bio/Tools/Run/PiseApplication/abiview.pm [pod]
Bio/Tools/Run/PiseApplication/addquart.pm [pod]
Bio/Tools/Run/PiseApplication/align2model.pm [pod]
Bio/Tools/Run/PiseApplication/alistat.pm [pod]
Bio/Tools/Run/PiseApplication/antigenic.pm [pod]
Bio/Tools/Run/PiseApplication/assp.pm [pod]
Bio/Tools/Run/PiseApplication/backtranseq.pm [pod]
Bio/Tools/Run/PiseApplication/bambe.pm [pod]
Bio/Tools/Run/PiseApplication/banana.pm [pod]
Bio/Tools/Run/PiseApplication/bionj.pm [pod]
Bio/Tools/Run/PiseApplication/biosed.pm [pod]
Bio/Tools/Run/PiseApplication/bl2seq.pm [pod]
Bio/Tools/Run/PiseApplication/blast2.pm [pod]
Bio/Tools/Run/PiseApplication/blimps.pm [pod]
Bio/Tools/Run/PiseApplication/blimps_block.pm [pod]
Bio/Tools/Run/PiseApplication/blimps_matrix.pm [pod]
Bio/Tools/Run/PiseApplication/boxshade.pm [pod]
Bio/Tools/Run/PiseApplication/btwisted.pm [pod]
Bio/Tools/Run/PiseApplication/cai.pm [pod]
Bio/Tools/Run/PiseApplication/cap.pm [pod]
Bio/Tools/Run/PiseApplication/cds.pm [pod]
Bio/Tools/Run/PiseApplication/chaos.pm [pod]
Bio/Tools/Run/PiseApplication/charge.pm [pod]
Bio/Tools/Run/PiseApplication/checktrans.pm [pod]
Bio/Tools/Run/PiseApplication/chips.pm [pod]
Bio/Tools/Run/PiseApplication/cirdna.pm [pod]
Bio/Tools/Run/PiseApplication/clique.pm [pod]
Bio/Tools/Run/PiseApplication/clustalw.pm [pod]
Bio/Tools/Run/PiseApplication/clustalw_convert.pm [pod]
Bio/Tools/Run/PiseApplication/codcmp.pm [pod]
Bio/Tools/Run/PiseApplication/coderet.pm [pod]
Bio/Tools/Run/PiseApplication/codnocod.pm [pod]
Bio/Tools/Run/PiseApplication/codontree.pm [pod]
Bio/Tools/Run/PiseApplication/codonw.pm [pod]
Bio/Tools/Run/PiseApplication/comalign.pm [pod]
Bio/Tools/Run/PiseApplication/combat.pm [pod]
Bio/Tools/Run/PiseApplication/compseq.pm [pod]
Bio/Tools/Run/PiseApplication/con_filter.pm [pod]
Bio/Tools/Run/PiseApplication/confmat.pm [pod]
Bio/Tools/Run/PiseApplication/cons.pm [pod]
Bio/Tools/Run/PiseApplication/consense.pm [pod]
Bio/Tools/Run/PiseApplication/consensus.pm [pod]
Bio/Tools/Run/PiseApplication/cpgplot.pm [pod]
Bio/Tools/Run/PiseApplication/cpgreport.pm [pod]
Bio/Tools/Run/PiseApplication/CSR.pm [pod]
Bio/Tools/Run/PiseApplication/cusp.pm [pod]
Bio/Tools/Run/PiseApplication/cutseq.pm [pod]
Bio/Tools/Run/PiseApplication/dan.pm [pod]
Bio/Tools/Run/PiseApplication/dca.pm [pod]
Bio/Tools/Run/PiseApplication/decorate.pm [pod]
Bio/Tools/Run/PiseApplication/degapseq.pm [pod]
Bio/Tools/Run/PiseApplication/descseq.pm [pod]
Bio/Tools/Run/PiseApplication/dialign2.pm [pod]
Bio/Tools/Run/PiseApplication/diffseq.pm [pod]
Bio/Tools/Run/PiseApplication/digest.pm [pod]
Bio/Tools/Run/PiseApplication/distmat.pm [pod]
Bio/Tools/Run/PiseApplication/distquart.pm [pod]
Bio/Tools/Run/PiseApplication/dnadist.pm [pod]
Bio/Tools/Run/PiseApplication/dnapars.pm [pod]
Bio/Tools/Run/PiseApplication/dollop.pm [pod]
Bio/Tools/Run/PiseApplication/domainer.pm [pod]
Bio/Tools/Run/PiseApplication/dotmatcher.pm [pod]
Bio/Tools/Run/PiseApplication/dotpath.pm [pod]
Bio/Tools/Run/PiseApplication/dottup.pm [pod]
Bio/Tools/Run/PiseApplication/drawgram.pm [pod]
Bio/Tools/Run/PiseApplication/drawpyr.pm [pod]
Bio/Tools/Run/PiseApplication/drawtree.pm [pod]
Bio/Tools/Run/PiseApplication/dreg.pm [pod]
Bio/Tools/Run/PiseApplication/druid.pm [pod]
Bio/Tools/Run/PiseApplication/dsc.pm [pod]
Bio/Tools/Run/PiseApplication/dssp.pm [pod]
Bio/Tools/Run/PiseApplication/einverted.pm [pod]
Bio/Tools/Run/PiseApplication/emma.pm [pod]
Bio/Tools/Run/PiseApplication/emowse.pm [pod]
Bio/Tools/Run/PiseApplication/environ.pm [pod]
Bio/Tools/Run/PiseApplication/eprimer3.pm [pod]
Bio/Tools/Run/PiseApplication/equicktandem.pm [pod]
Bio/Tools/Run/PiseApplication/est2genome.pm [pod]
Bio/Tools/Run/PiseApplication/etandem.pm [pod]
Bio/Tools/Run/PiseApplication/extractfeat.pm [pod]
Bio/Tools/Run/PiseApplication/extractseq.pm [pod]
Bio/Tools/Run/PiseApplication/fasta.pm [pod]
Bio/Tools/Run/PiseApplication/fastdnaml.pm [pod]
Bio/Tools/Run/PiseApplication/fastrna.pm [pod]
Bio/Tools/Run/PiseApplication/filtersites.pm [pod]
Bio/Tools/Run/PiseApplication/findkm.pm [pod]
Bio/Tools/Run/PiseApplication/fitch.pm [pod]
Bio/Tools/Run/PiseApplication/fmtseq.pm [pod]
Bio/Tools/Run/PiseApplication/freak.pm [pod]
Bio/Tools/Run/PiseApplication/fuzznuc.pm [pod]
Bio/Tools/Run/PiseApplication/fuzzpro.pm [pod]
Bio/Tools/Run/PiseApplication/fuzztran.pm [pod]
Bio/Tools/Run/PiseApplication/gb2xml.pm [pod]
Bio/Tools/Run/PiseApplication/geecee.pm [pod]
Bio/Tools/Run/PiseApplication/genscan.pm [pod]
Bio/Tools/Run/PiseApplication/getblock.pm [pod]
Bio/Tools/Run/PiseApplication/getorf.pm [pod]
Bio/Tools/Run/PiseApplication/gff2ps.pm [pod]
Bio/Tools/Run/PiseApplication/gibbs.pm [pod]
Bio/Tools/Run/PiseApplication/gibbs_scan.pm [pod]
Bio/Tools/Run/PiseApplication/golden.pm [pod]
Bio/Tools/Run/PiseApplication/grailclnt.pm [pod]
Bio/Tools/Run/PiseApplication/gruppi.pm [pod]
Bio/Tools/Run/PiseApplication/helixturnhelix.pm [pod]
Bio/Tools/Run/PiseApplication/hmmalign.pm [pod]
Bio/Tools/Run/PiseApplication/hmmbuild.pm [pod]
Bio/Tools/Run/PiseApplication/hmmcalibrate.pm [pod]
Bio/Tools/Run/PiseApplication/hmmconvert.pm [pod]
Bio/Tools/Run/PiseApplication/hmmemit.pm [pod]
Bio/Tools/Run/PiseApplication/hmmer2sam.pm [pod]
Bio/Tools/Run/PiseApplication/hmmfetch.pm [pod]
Bio/Tools/Run/PiseApplication/hmmpfam.pm [pod]
Bio/Tools/Run/PiseApplication/hmmscore.pm [pod]
Bio/Tools/Run/PiseApplication/hmmsearch.pm [pod]
Bio/Tools/Run/PiseApplication/hmoment.pm [pod]
Bio/Tools/Run/PiseApplication/homology.pm [pod]
Bio/Tools/Run/PiseApplication/html4blast.pm [pod]
Bio/Tools/Run/PiseApplication/iep.pm [pod]
Bio/Tools/Run/PiseApplication/infoalign.pm [pod]
Bio/Tools/Run/PiseApplication/infoseq.pm [pod]
Bio/Tools/Run/PiseApplication/interface.pm [pod]
Bio/Tools/Run/PiseApplication/isochore.pm [pod]
Bio/Tools/Run/PiseApplication/kitsch.pm [pod]
Bio/Tools/Run/PiseApplication/lassap.pm [pod]
Bio/Tools/Run/PiseApplication/lindna.pm [pod]
Bio/Tools/Run/PiseApplication/listor.pm [pod]
Bio/Tools/Run/PiseApplication/loadseq.pm [pod]
Bio/Tools/Run/PiseApplication/lvb.pm [pod]
Bio/Tools/Run/PiseApplication/makehist.pm [pod]
Bio/Tools/Run/PiseApplication/map.pm [pod]
Bio/Tools/Run/PiseApplication/marscan.pm [pod]
Bio/Tools/Run/PiseApplication/maskfeat.pm [pod]
Bio/Tools/Run/PiseApplication/maskseq.pm [pod]
Bio/Tools/Run/PiseApplication/matcher.pm [pod]
Bio/Tools/Run/PiseApplication/megamerger.pm [pod]
Bio/Tools/Run/PiseApplication/melting.pm [pod]
Bio/Tools/Run/PiseApplication/merger.pm [pod]
Bio/Tools/Run/PiseApplication/mfold.pm [pod]
Bio/Tools/Run/PiseApplication/mix.pm [pod]
Bio/Tools/Run/PiseApplication/modelfromalign.pm [pod]
Bio/Tools/Run/PiseApplication/most.pm [pod]
Bio/Tools/Run/PiseApplication/mreps.pm [pod]
Bio/Tools/Run/PiseApplication/msa.pm [pod]
Bio/Tools/Run/PiseApplication/msbar.pm [pod]
Bio/Tools/Run/PiseApplication/mspcrunch.pm [pod]
Bio/Tools/Run/PiseApplication/mview_alig.pm [pod]
Bio/Tools/Run/PiseApplication/mview_blast.pm [pod]
Bio/Tools/Run/PiseApplication/mwfilter.pm [pod]
Bio/Tools/Run/PiseApplication/needle.pm [pod]
Bio/Tools/Run/PiseApplication/neighbor.pm [pod]
Bio/Tools/Run/PiseApplication/newcpgreport.pm [pod]
Bio/Tools/Run/PiseApplication/newcpgseek.pm [pod]
Bio/Tools/Run/PiseApplication/newseq.pm [pod]
Bio/Tools/Run/PiseApplication/njdist.pm [pod]
Bio/Tools/Run/PiseApplication/nnssp.pm [pod]
Bio/Tools/Run/PiseApplication/notseq.pm [pod]
Bio/Tools/Run/PiseApplication/nrscope.pm [pod]
Bio/Tools/Run/PiseApplication/nthseq.pm [pod]
Bio/Tools/Run/PiseApplication/octanol.pm [pod]
Bio/Tools/Run/PiseApplication/oddcomp.pm [pod]
Bio/Tools/Run/PiseApplication/palindrome.pm [pod]
Bio/Tools/Run/PiseApplication/pam.pm [pod]
Bio/Tools/Run/PiseApplication/parciquart.pm [pod]
Bio/Tools/Run/PiseApplication/pars.pm [pod]
Bio/Tools/Run/PiseApplication/pasteseq.pm [pod]
Bio/Tools/Run/PiseApplication/patmatdb.pm [pod]
Bio/Tools/Run/PiseApplication/patmatmotifs.pm [pod]
Bio/Tools/Run/PiseApplication/patser.pm [pod]
Bio/Tools/Run/PiseApplication/pdbsearch.pm [pod]
Bio/Tools/Run/PiseApplication/pepcoil.pm [pod]
Bio/Tools/Run/PiseApplication/pepinfo.pm [pod]
Bio/Tools/Run/PiseApplication/pepnet.pm [pod]
Bio/Tools/Run/PiseApplication/pepstats.pm [pod]
Bio/Tools/Run/PiseApplication/pepwheel.pm [pod]
Bio/Tools/Run/PiseApplication/pepwindow.pm [pod]
Bio/Tools/Run/PiseApplication/pepwindowall.pm [pod]
Bio/Tools/Run/PiseApplication/pestfind.pm [pod]
Bio/Tools/Run/PiseApplication/pftools.pm [pod]
Bio/Tools/Run/PiseApplication/phiblast.pm [pod]
Bio/Tools/Run/PiseApplication/phyml.pm [pod]
Bio/Tools/Run/PiseApplication/pima.pm [pod]
Bio/Tools/Run/PiseApplication/plotcon.pm [pod]
Bio/Tools/Run/PiseApplication/plotorf.pm [pod]
Bio/Tools/Run/PiseApplication/plsearch.pm [pod]
Bio/Tools/Run/PiseApplication/polydot.pm [pod]
Bio/Tools/Run/PiseApplication/pratt.pm [pod]
Bio/Tools/Run/PiseApplication/predator.pm [pod]
Bio/Tools/Run/PiseApplication/preg.pm [pod]
Bio/Tools/Run/PiseApplication/prettyalign.pm [pod]
Bio/Tools/Run/PiseApplication/prettyplot.pm [pod]
Bio/Tools/Run/PiseApplication/prettyseq.pm [pod]
Bio/Tools/Run/PiseApplication/primersearch.pm [pod]
Bio/Tools/Run/PiseApplication/primo.pm [pod]
Bio/Tools/Run/PiseApplication/prodom.pm [pod]
Bio/Tools/Run/PiseApplication/profit.pm [pod]
Bio/Tools/Run/PiseApplication/prophecy.pm [pod]
Bio/Tools/Run/PiseApplication/prophet.pm [pod]
Bio/Tools/Run/PiseApplication/prose.pm [pod]
Bio/Tools/Run/PiseApplication/prot_nucml.pm [pod]
Bio/Tools/Run/PiseApplication/protal2dna.pm [pod]
Bio/Tools/Run/PiseApplication/protdist.pm [pod]
Bio/Tools/Run/PiseApplication/protpars.pm [pod]
Bio/Tools/Run/PiseApplication/pscan.pm [pod]
Bio/Tools/Run/PiseApplication/psiblast.pm [pod]
Bio/Tools/Run/PiseApplication/psort2.pm [pod]
Bio/Tools/Run/PiseApplication/Puzzle.pm [pod]
Bio/Tools/Run/PiseApplication/pyramids.pm [pod]
Bio/Tools/Run/PiseApplication/pyreval.pm [pod]
Bio/Tools/Run/PiseApplication/qstar.pm [pod]
Bio/Tools/Run/PiseApplication/quicktree.pm [pod]
Bio/Tools/Run/PiseApplication/readnexus.pm [pod]
Bio/Tools/Run/PiseApplication/readseq.pm [pod]
Bio/Tools/Run/PiseApplication/recoder.pm [pod]
Bio/Tools/Run/PiseApplication/redata.pm [pod]
Bio/Tools/Run/PiseApplication/remap.pm [pod]
Bio/Tools/Run/PiseApplication/repeats.pm [pod]
Bio/Tools/Run/PiseApplication/restover.pm [pod]
Bio/Tools/Run/PiseApplication/restrict.pm [pod]
Bio/Tools/Run/PiseApplication/revseq.pm [pod]
Bio/Tools/Run/PiseApplication/rnadistance.pm [pod]
Bio/Tools/Run/PiseApplication/rnaeval.pm [pod]
Bio/Tools/Run/PiseApplication/rnafold.pm [pod]
Bio/Tools/Run/PiseApplication/rnaga.pm [pod]
Bio/Tools/Run/PiseApplication/rnaheat.pm [pod]
Bio/Tools/Run/PiseApplication/rnainverse.pm [pod]
Bio/Tools/Run/PiseApplication/rnapdist.pm [pod]
Bio/Tools/Run/PiseApplication/rnasubopt.pm [pod]
Bio/Tools/Run/PiseApplication/sam2hmmer.pm [pod]
Bio/Tools/Run/PiseApplication/sampleseqs.pm [pod]
Bio/Tools/Run/PiseApplication/saps.pm [pod]
Bio/Tools/Run/PiseApplication/satellites.pm [pod]
Bio/Tools/Run/PiseApplication/scan_for_matches.pm [pod]
Bio/Tools/Run/PiseApplication/scope.pm [pod]
Bio/Tools/Run/PiseApplication/scopparse.pm [pod]
Bio/Tools/Run/PiseApplication/seqboot.pm [pod]
Bio/Tools/Run/PiseApplication/seqgen.pm [pod]
Bio/Tools/Run/PiseApplication/seqmatchall.pm [pod]
Bio/Tools/Run/PiseApplication/seqsblast.pm [pod]
Bio/Tools/Run/PiseApplication/seqstat.pm [pod]
Bio/Tools/Run/PiseApplication/showalign.pm [pod]
Bio/Tools/Run/PiseApplication/showfeat.pm [pod]
Bio/Tools/Run/PiseApplication/showorf.pm [pod]
Bio/Tools/Run/PiseApplication/showseq.pm [pod]
Bio/Tools/Run/PiseApplication/shuffleseq.pm [pod]
Bio/Tools/Run/PiseApplication/sigcleave.pm [pod]
Bio/Tools/Run/PiseApplication/siggen.pm [pod]
Bio/Tools/Run/PiseApplication/sigscan.pm [pod]
Bio/Tools/Run/PiseApplication/silent.pm [pod]
Bio/Tools/Run/PiseApplication/sirna.pm [pod]
Bio/Tools/Run/PiseApplication/splitter.pm [pod]
Bio/Tools/Run/PiseApplication/sreformat.pm [pod]
Bio/Tools/Run/PiseApplication/stretcher.pm [pod]
Bio/Tools/Run/PiseApplication/stride.pm [pod]
Bio/Tools/Run/PiseApplication/stssearch.pm [pod]
Bio/Tools/Run/PiseApplication/supermatcher.pm [pod]
Bio/Tools/Run/PiseApplication/syco.pm [pod]
Bio/Tools/Run/PiseApplication/tacg.pm [pod]
Bio/Tools/Run/PiseApplication/tfscan.pm [pod]
Bio/Tools/Run/PiseApplication/tipdate.pm [pod]
Bio/Tools/Run/PiseApplication/tmap.pm [pod]
Bio/Tools/Run/PiseApplication/toppred.pm [pod]
Bio/Tools/Run/PiseApplication/tranalign.pm [pod]
Bio/Tools/Run/PiseApplication/transeq.pm [pod]
Bio/Tools/Run/PiseApplication/treealign.pm [pod]
Bio/Tools/Run/PiseApplication/trimest.pm [pod]
Bio/Tools/Run/PiseApplication/trimseq.pm [pod]
Bio/Tools/Run/PiseApplication/trnascan.pm [pod]
Bio/Tools/Run/PiseApplication/twofeat.pm [pod]
Bio/Tools/Run/PiseApplication/unroot.pm [pod]
Bio/Tools/Run/PiseApplication/vectorstrip.pm [pod]
Bio/Tools/Run/PiseApplication/water.pm [pod]
Bio/Tools/Run/PiseApplication/weighbor.pm [pod]
Bio/Tools/Run/PiseApplication/whichdb.pm [pod]
Bio/Tools/Run/PiseApplication/wise2.pm [pod]
Bio/Tools/Run/PiseApplication/wobble.pm [pod]
Bio/Tools/Run/PiseApplication/wordcount.pm [pod]
Bio/Tools/Run/PiseApplication/wordmatch.pm [pod]
Bio/Tools/Run/PiseApplication/wublast2.pm [pod]
Bio/Tools/Run/PiseApplication/xblast.pm [pod]
Bio/Tools/Run/PiseApplication/xpound.pm [pod]
Bio/Tools/Run/PiseJob.pm [pod]
Bio/Tools/Run/PiseJobParser.pm [pod]
Bio/Tools/Run/PiseWorkflow.pm [pod]
Bio/Tools/Run/Primate.pm [pod]
Bio/Tools/Run/Primer3.pm [pod]
Bio/Tools/Run/Prints.pm [pod]
Bio/Tools/Run/Profile.pm [pod]
Bio/Tools/Run/Promoterwise.pm [pod]
Bio/Tools/Run/Pseudowise.pm [pod]
Bio/Tools/Run/RepeatMasker.pm [pod]
Bio/Tools/Run/Seg.pm [pod]
Bio/Tools/Run/Signalp.pm [pod]
Bio/Tools/Run/Tmhmm.pm [pod]
Bio/Tools/Run/TribeMCL.pm [pod]
Bio/Tools/Run/Vista.pm [pod]
Build.PL
Changes
examples/pise/blast-kun.pl
examples/pise/blast2.pl
examples/pise/clustalw.pl
examples/pise/dnadist.data
examples/pise/dnadist.pl
examples/pise/genscan.pl
examples/pise/needle.pl
examples/pise/phylo-kun.pl
examples/pise/toppred.pl
INSTALL
INSTALL.PROGRAMS
Makefile.PL
MANIFEST	This list of files
META.yml
ModuleBuildBioperl.pm
README
scripts/bioperl_application_installer.PLS [pod]
scripts/multi_hmmsearch.PLS [pod]
scripts/panalysis.PLS [pod]
scripts/papplmaker.PLS [pod]
scripts/run_neighbor.PLS [pod]
scripts/run_protdist.PLS
t/Amap.t
t/Analysis_soap.t
t/AnalysisFactory_soap.t
t/Blat.t
t/Clustalw.t
t/Coil.t
t/Consense.t
t/data/amino.fa
t/data/blat_dna.fa
t/data/cel-cbr-fam.aln
t/data/codeml.mlc
t/data/coil_protein_input
t/data/consense.treefile
t/data/cysprot.fa
t/data/cysprot.msf
t/data/cysprot1a.fa
t/data/cysprot1a.msf
t/data/cysprot1b.fa
t/data/cysprot1b.msf
t/data/dba1a.fa
t/data/dba1b.fa
t/data/dba2.fa
t/data/dna1.fa
t/data/dna2.fa
t/data/ecolitst.fa
t/data/eponine.fa
t/data/exonerate_cdna.fa
t/data/exonerate_cdna_rev.fa
t/data/exonerate_genomic.fa
t/data/exonerate_genomic_rev.fa
t/data/fasta.fa
t/data/fastalib.fa
t/data/fastaprot.fa
t/data/fontfile
t/data/FootPrinter.seq.fa
t/data/Genscan.FastA
t/data/gf-s85.phylip
t/data/hmmpfam_protein_input
t/data/human.genomic
t/data/lagan_dna.fa
t/data/lvb.fa
t/data/lvb_sequential.phy
t/data/neighbor.dist
t/data/new_dna.fa
t/data/new_pep.fa
t/data/NM_002254.gb
t/data/pfam_sample_R11
t/data/Phrap.fa
t/data/primate_query.fa
t/data/primate_target.fa
t/data/Primer3.fa
t/data/prints.dat
t/data/Prints_prot.FastA
t/data/profile_prot.FastA
t/data/prosite.dat
t/data/protpars.phy
t/data/ps1.fa
t/data/repeatmasker.fa
t/data/road.pep
t/data/signalp_input_protein
t/data/sim4_cdna.fa
t/data/sim4_database.fa
t/data/sim4_genomic.fa
t/data/test.txt
t/data/test_prot.FastA
t/data/tree_of_life
t/data/treefile.example
t/data/TribeMCL.bls
t/data/TribeMCL.desc
t/data/vista.cls
t/data/vista.gff
t/DBA.t
t/DrawGram.t
t/DrawTree.t
t/EMBOSS.t
t/Eponine.t
t/Exonerate.t
t/FootPrinter.t
t/Genewise.t
t/Genscan.t
t/Hmmer.t
t/Kalign.t
t/Lagan.t
t/lib/Test/Builder.pm
t/lib/Test/Builder/Module.pm
t/lib/Test/Builder/Tester.pm
t/lib/Test/More.pm
t/lib/Test/Simple.pm
t/lib/Test/Tutorial.pod
t/LVB.t
t/MAFFT.t
t/Mdust.t
t/Molphy.t
t/Muscle.t
t/Neighbor.t
t/PAML.t
t/Phrap.t
t/Pise.t
t/Primate.t
t/Primer3.t
t/Prints.t
t/Probalign.t
t/Probcons.t
t/Profile.t
t/Promoterwise.t
t/ProtDist.t
t/ProtPars.t
t/Pseudowise.t
t/RepeatMasker.t
t/Seg.t
t/SeqBoot.t
t/Signalp.t
t/Sim4.t
t/StandAloneFasta.t
t/TCoffee.t
t/Tmhmm.t
t/TribeMCL.t
t/Vista.t