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Distribution Released
Bio_AssemblyImprovement-1.160490 Improve an assembly by scaffolding, contig ordering and gap closing. [Download] [Browse] 18 Feb 2016
Bio-VertRes-Config-1.133090 Create config files for the vr-codebase pipelines [Download] [Browse] 05 Nov 2013
Bio-Tradis-1.3.1 Bio-Tradis contains a set of tools to analyse the output from TraDIS analyses. For more information on the TraDIS method, see [Download] [Browse] 23 Sep 2016
Bio-Roary-3.7.0 Create a pan genome [Download] [Browse] 23 Sep 2016
Bio-RetrieveAssemblies-1.1.5 Download assemblies from GenBank [Download] [Browse] 23 Jul 2015
Bio-Pipeline-Comparison-1.123050 Comparative assesment of variant calling (CAVar) [Download] [Browse] 31 Oct 2012
Bio-MLST-Check-2.1.1534813 Multilocus sequence type checking using blast [Download] [Browse] 14 Dec 2015
Bio-InterProScanWrapper-1.133090 Take in a file of proteins and predict functions using interproscan [Download] [Browse] 05 Nov 2013
Bio-AutomatedAnnotation-1.133090 Automated annotation of assemblies [Download] [Browse] 05 Nov 2013