Andrew Page > Bio-AutomatedAnnotation-1.133090 > Bio::AutomatedAnnotation::ParseGenesFromGFF

Download:
Bio-AutomatedAnnotation-1.133090.tar.gz

Dependencies

Annotate this POD

Website

View/Report Bugs
Source  

NAME ^

Bio::AutomatedAnnotation::ParseGenesFromGFF - Parse a GFF file and efficiency extract the gene sequence.

VERSION ^

version 1.133090

SYNOPSIS ^

Automated annotation of assemblies. use Bio::AutomatedAnnotation::ParseGenesFromGFF;

   my $obj = Bio::AutomatedAnnotation::ParseGenesFromGFF->new(
     gff_file   => 'abc.gff',
     search_query => 'mecA'
   );
   $obj->matching_features;

AUTHOR ^

Andrew J. Page <ap13@sanger.ac.uk>

COPYRIGHT AND LICENSE ^

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

  The GNU General Public License, Version 3, June 2007
syntax highlighting: