Bio::Roary::AccessoryClustering - Take an a clusters file from CD-hit and the fasta file and output a fasta file without full clusters
version 3.11.3
Take an a clusters file from CD-hit and the fasta file and output a fasta file without full clusters use Bio::Roary::AccessoryClustering;
my $obj = Bio::Roary::AccessoryClustering->new( input_file => 'accessory_binary_genes.fa', identity => 0.96, cpus => 10, ); $obj->sample_weights();
Andrew J. Page <ap13@sanger.ac.uk>
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
To install Bio::Roary, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::Roary
CPAN shell
perl -MCPAN -e shell install Bio::Roary
For more information on module installation, please visit the detailed CPAN module installation guide.