| This Release | InSilicoSpectro-Databanks-0.0.43 | [Download] [Browse] | 25 Aug 2008 | |||
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| License | LGPL | |||||
| Special Files |
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| InSilicoSpectro::Databanks | parsing protein/nucleotides sequence databanks (fasta, uniprot...) | 0.0.43 | |
| InSilicoSpectro::Databanks::DBEntry | fasta databank entry + header's annotated info | ||
| InSilicoSpectro::Databanks::DBEntryUniprot | Uniprot formated entry |
| InSilico::Databanks::DBEntry | fasta databank entry + header's annotated info |
| cgiUniprotEntry.pl | cgi scripts to grep a uniprot AC and print a fasta with derivated sequence |
| fasta-decoy.pl | decoy input databanks following several moethods |
| fasta-shuffle-notryptic.pl | shuffle each sequence, without any original tryptic peptide |
| ncbinr2phenyxfasta.pl | tranfoorm ncbirn bank into fasta with annotated headers |
| uniprotdat2fasta.pl | converts uniprot native text format (.dat or .seq) into fasta file, reporting varsplic, signal, peptide, PTM, conflicts.... |
