View on
MetaCPAN
Alexandre Masselot > InSilicoSpectro > splitPeptSpectraAtRandom.pl

Download:
InSilicoSpectro-1.3.24.tar.gz

Annotate this POD

CPAN RT

New  3
Open  3
View/Report Bugs
Source  

NAME ^

splitPeptSpectraAtRandom.pl - Splits a .peptSpectra.xml file in two .peptSpectra.xml files

SYNOPSIS ^

splitPeptSpectraAtRandom.pl [options] peptSpectra.xml files

OPTIONS ^

Use splitPeptSpectraAtRandom.pl -h

DESCRIPTION ^

The script splits a .peptSpectra.xml file in two .peptSpectra.xml files randomly. It is mainly used for creating a training and a test set from one original set of peptide/spectrum matches.

The respective sizes of the two created files can be defined via a proportion or by setting a fixed number of requested matches for the first output file.

EXAMPLE ^

./splitPeptSpectraAtRandom.pl --proportion=0.5 --out=test example.peptSpectra.xml

AUTHOR ^

Jacques Colinge

syntax highlighting: