queryUMLS.pl - this program returns a semantic similarity score between two concepts
This is a utility that takes as input either two terms (DEFAULT) or two CUIs and returns the similarity between the two.
Usage: queryUMLS.pl [OPTIONS] TERM1 TERM2
The input for TERM1 and TERM2 are actually CUIs rather than terms
Username is required to access the umls database on MySql
Password is required to access the umls database on MySql
Use the module implementing the Leacock and Chodorow (1998) measure
Use the module implementing the simple edge counting measure of semantic relatedness (DEFAULT).
Hostname where mysql is located. DEFAULT: localhost
Database contain UMLS DEFAULT: umls
Displays the quick summary of program options.
Displays the version information.
disambiguate.pl creates two directories. One containing the arff files and the other containing the weka files. In the weka directory, the overall averages are stored in the OverallAverage file.
Bridget T. McInnes, University of Minnesota
Copyright (c) 2007-2008,
Bridget T. McInnes, University of Minnesota
bthomson at cs.umn.edu
Ted Pedersen, University of Minnesota Duluth
tpederse at d.umn.edu
This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program; if not, write to:
The Free Software Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.
