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Carla Cummins
>
Bio-Tradis-1.132190
> MANIFEST
Download:
Bio-Tradis-1.132190.tar.gz
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Source
LICENSE
MANIFEST
META.yml
Makefile.PL
README
README.md
bin/add_tradis_tags
[
pod
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bin/bacteria_tradis
[
pod
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bin/check_tradis_tags
bin/filter_tradis_tags
[
pod
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bin/remove_tradis_tags
[
pod
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bin/tradis_plot
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pod
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dist.ini
lib/Bio/Tradis.pm
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pod
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lib/Bio/Tradis/AddTagsToSeq.pm
[
pod
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lib/Bio/Tradis/Analysis/Exceptions.pm
[
pod
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lib/Bio/Tradis/Analysis/InsertSite.pm
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pod
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lib/Bio/Tradis/CommandLine/AddTags.pm
[
pod
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lib/Bio/Tradis/CommandLine/CheckTags.pm
[
pod
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lib/Bio/Tradis/CommandLine/FilterFastqTags.pm
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pod
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lib/Bio/Tradis/CommandLine/PlotTradis.pm
[
pod
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lib/Bio/Tradis/CommandLine/RemoveFastqTags.pm
[
pod
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lib/Bio/Tradis/CommandLine/RunMapping.pm
[
pod
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lib/Bio/Tradis/CommandLine/TradisAnalysis.pm
[
pod
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lib/Bio/Tradis/CommandLine/TradisBam.pm
[
pod
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lib/Bio/Tradis/DetectTags.pm
[
pod
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lib/Bio/Tradis/FilterTags.pm
[
pod
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lib/Bio/Tradis/Map.pm
[
pod
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lib/Bio/Tradis/Parser/Bam.pm
[
pod
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lib/Bio/Tradis/Parser/Fastq.pm
[
pod
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lib/Bio/Tradis/RemoveTags.pm
[
pod
]
lib/Bio/Tradis/RunTradis.pm
[
pod
]
lib/Bio/Tradis/TradisPlot.pm
[
pod
]
t/Bio/Tradis/AddTagsToSeq.t
t/Bio/Tradis/Analysis/InsertSite.t
t/Bio/Tradis/DetectTags.t
t/Bio/Tradis/FilterTags.t
t/Bio/Tradis/Map.t
t/Bio/Tradis/Parser/Bam.t
t/Bio/Tradis/Parser/Fastq.t
t/Bio/Tradis/RemoveTags.t
t/Bio/Tradis/RunTradis.t
t/Bio/Tradis/TradisPlot.t
t/data/AddTags/expected_tradis.bam
t/data/AddTags/sample_sm_no_tr.bam
t/data/AddTags/sample_sm_tr.bam
t/data/DetectTags/sample_sm_no_tr.bam
t/data/DetectTags/sample_sm_tr.bam
t/data/FilterTags/expected.1mm.caa.fastq
t/data/FilterTags/expected.caa.fastq
t/data/FilterTags/expected.tna.fastq
t/data/FilterTags/sample.fastq
t/data/FilterTags/sample.fastq.gz
t/data/InsertSite/small_multi_sequence.bam
t/data/Map/expected.mapped
t/data/Map/smallref.fa
t/data/Map/test.fastq
t/data/Parsers/test.bam
t/data/Parsers/test.fastq
t/data/RemoveTags/expected.rm.1mm.caa.fastq
t/data/RemoveTags/expected.rm.caa.fastq
t/data/RemoveTags/expected.rm.tna.fastq
t/data/RemoveTags/sample.caa.fastq
t/data/RemoveTags/sample.tna.fastq
t/data/RunTradis/expected.1mm.plot.gz
t/data/RunTradis/expected.plot.gz
t/data/RunTradis/filelist.txt
t/data/RunTradis/filtered.fastq
t/data/RunTradis/mapped.sam
t/data/RunTradis/notags.fastq
t/data/RunTradis/smallref.fa
t/data/RunTradis/test.tagged.fastq
t/data/RunTradis/test.tagged.fastq.gz
t/data/RunTradis/test2.tagged.fastq
t/data/RunTradis/test2.tagged.fastq.gz
t/data/TradisPlot/expected.plot.gz
t/data/TradisPlot/sample.fastq
t/data/TradisPlot/test.mapped.bam
t/requires_external.t
