Christopher Fields > BioPerl-1.6.901 > Bio::DBLinkContainerI

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Module Version: 1.006901   Source   Latest Release: BioPerl-1.6.924

NAME ^

Bio::DBLinkContainerI - Abstract interface for any object wanting to use database cross references

SYNOPSIS ^

    # get an objects containing database cross reference

        foreach $obj ( @objs ) {
                if( $obj->isa('Bio::DBLinkContainerI') ) {
                        foreach $dblink ( $obj->each_DBLink() ) {
                                # do stuff
                        }
                }
        }

DESCRIPTION ^

This interface defines the functions one can expect for any object wanting to use database cross-references. This class does not actually provide any implementation, it just provides the definitions of what methods one can call.

The database cross-references are implemented as Bio::Annotation::DBLink objects.

FEEDBACK ^

Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to one of the Bioperl mailing lists. Your participation is much appreciated.

  bioperl-l@bioperl.org                  - General discussion
  http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

Support

Please direct usage questions or support issues to the mailing list:

bioperl-l@bioperl.org

rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the web:

  https://redmine.open-bio.org/projects/bioperl/

AUTHOR - Heikki Lehvaslaiho ^

Email: heikki-at-bioperl-dot-org

APPENDIX ^

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

each_DBLink

 Title   : each_DBLink
 Usage   : foreach $ref ( $self->each_DBlink() )
 Function: gets an array of DBlink of objects
 Example :
 Returns : an array of Bio::Annotation::DBLink objects
 Args    : none
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