Bio::SeqIO::nexml - NeXML sequence input/output stream
Do not use this module directly. Use it via the Bio::SeqIO class.
This object can transform Bio::Seq objects to and from NeXML format. For more information on the NeXML standard, visit http://www.nexml.org.
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The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : next_seq Usage : $seq = $stream->next_seq() Function: returns the next sequence in the stream Returns : L<Bio::Seq> object Args : NONE
Title : rewind Usage : $seqio->rewind Function: Resets the stream Returns : none Args : none
Title : doc Usage : $treeio->doc Function: Returns the biophylo nexml document object Returns : Bio::Phylo::Project Args : none or Bio::Phylo::Project object
Title : write_seq Usage : $stream->write_seq(@seq) Function: Writes the $seq object into the stream Returns : 1 for success and 0 for error Args : Array of 1 or more L<Bio::PrimarySeqI> objects