Christopher Fields > BioPerl-1.6.923 > Bio::LiveSeq::Intron

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Source   Latest Release: BioPerl-1.6.924

NAME ^

Bio::LiveSeq::Intron - Range abstract class for LiveSeq

SYNOPSIS ^

  # documentation needed

DESCRIPTION ^

Class for INTRON objects. They consist of a beginlabel, an endlabel (both referring to a LiveSeq DNA object) and a strand. The strand could be 1 (forward strand, default), -1 (reverse strand).

AUTHOR - Joseph A.L. Insana ^

Email: Insana@ebi.ac.uk, jinsana@gmx.net

APPENDIX ^

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

new

  Title   : new
  Usage   : $intron1=Bio::LiveSeq::Intron->new(-seq => $objref,
                                               -start => $startlabel,
                                               -end => $endlabel, 
                                               -strand => 1
                                               );

  Function: generates a new Bio::LiveSeq::Intron
  Returns : reference to a new object of class Intron
  Errorcode -1
  Args    : two labels and an integer
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