OBO::CCO::Interaction - An interaction from IntAct
my $interaction = OBO::CCO::Interaction->new;
An object that stores the needed information for an interaction from Intact
Mikel Egana Aranguren, mikel.eganaaranguren@cs.man.ac.uk
Copyright (C) 2007 by Mikel Egana Aranguren
This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself, either Perl version 5.8.7 or, at your option, any later version of Perl 5 you may have available.
Usage - print $interaction->primaryRef() or $interaction->primaryRef($primaryRef) Returns - the IntAct id of the interaction (e.g. EBI-464846) Args - the IntAct id of the interaction (e.g. EBI-464846) Function - gets/sets the IntAct id of the interaction (e.g. EBI-464846)
Usage - print $interaction->interactionType() or $interaction->interactionType($interactionType) Returns - the type of the interaction (e.g. "physical association") Args - the type of the interaction (e.g. "physical association") Function - gets/sets the type of the interaction (e.g. "physical association")
Usage - print $interaction->shortLabel() or $interaction->shortLabel($shortLabel) Returns - the short label of the interaction (e.g. "q9p7r6-rse1") Args - the short label of the interaction (e.g. "q9p7r6-rse1") Function - gets/sets the short label of the interaction (e.g. "q9p7r6-rse1")
Usage - print $interaction->fullName() or $interaction->fullName($fullName) Returns - the full name of the interaction (e.g. "Proteomic analysis identifies a new complex required for nuclear pre-mRNA retention and splicing") Args - the full name of the interaction (e.g. "Proteomic analysis identifies a new complex required for nuclear pre-mRNA retention and splicing") Function - gets/sets the full name of the interaction (e.g. "Proteomic analysis identifies a new complex required for nuclear pre-mRNA retention and splicing")
Usage - $interaction->interactorRef() or $interaction->interactorRef(@interactorRef) Returns - the array of interactor ids that participate in this interaction Args - the array of interactor ids that participate in this interaction Function - gets/sets the array of interactor ids that participate in this interaction
Usage - $interaction->interactorRefRoles() or $interaction->interactorRefRoles(%interactorRefRoles) Returns - the hash of interactor ids and their roles Args - the hash of interactor ids and their roles Function - gets/sets the hash of interactor ids and their roles
