Florent Angly > Bio-Community > MANIFEST

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lib/Bio/Community.pm  [pod]
lib/Bio/Community/Alpha.pm  [pod]
lib/Bio/Community/IO.pm  [pod]
lib/Bio/Community/IO/Driver/biom.pm  [pod]
lib/Bio/Community/IO/Driver/dummy.pm  [pod]
lib/Bio/Community/IO/Driver/gaas.pm  [pod]
lib/Bio/Community/IO/Driver/generic.pm  [pod]
lib/Bio/Community/IO/Driver/qiime.pm  [pod]
lib/Bio/Community/IO/Driver/unifrac.pm  [pod]
lib/Bio/Community/IO/FormatGuesser.pm  [pod]
lib/Bio/Community/Member.pm  [pod]
lib/Bio/Community/Meta.pm  [pod]
lib/Bio/Community/Meta/Beta.pm  [pod]
lib/Bio/Community/Meta/Gamma.pm  [pod]
lib/Bio/Community/Role/Classified.pm  [pod]
lib/Bio/Community/Role/Described.pm  [pod]
lib/Bio/Community/Role/IO.pm  [pod]
lib/Bio/Community/Role/Locked.pm  [pod]
lib/Bio/Community/Role/PRNG.pm  [pod]
lib/Bio/Community/Role/Sequenced.pm  [pod]
lib/Bio/Community/Role/Table.pm  [pod]
lib/Bio/Community/Role/Weighted.pm  [pod]
lib/Bio/Community/TaxonomyUtils.pm  [pod]
lib/Bio/Community/Tools/Accumulator.pm  [pod]
lib/Bio/Community/Tools/IdConverter.pm  [pod]
lib/Bio/Community/Tools/Rarefier.pm  [pod]
lib/Bio/Community/Tools/Sampler.pm  [pod]
lib/Bio/Community/Tools/ShrapnelCleaner.pm  [pod]
lib/Bio/Community/Tools/Summarizer.pm  [pod]
lib/Bio/Community/Tools/Transformer.pm  [pod]
lib/Bio/Community/Types.pm  [pod]
LICENSE
MANIFEST This list of files
META.json
META.yml
README
scripts/bc_accumulate  [pod]
scripts/bc_add_taxonomy  [pod]
scripts/bc_clean_shrapnel  [pod]
scripts/bc_convert_files  [pod]
scripts/bc_convert_ids  [pod]
scripts/bc_correct_misassignments  [pod]
scripts/bc_get_info  [pod]
scripts/bc_manage_members  [pod]
scripts/bc_manage_samples  [pod]
scripts/bc_measure_alpha  [pod]
scripts/bc_measure_beta  [pod]
scripts/bc_rarefy  [pod]
scripts/bc_relative_to_absolute  [pod]
scripts/bc_remove_unexpected_members  [pod]
scripts/bc_summarize  [pod]
t/Alpha.t
t/Community.t
t/data/biom_dups.txt
t/data/biom_float.txt
t/data/biom_invalid.txt
t/data/biom_minimal_dense.txt
t/data/biom_no_spp.txt
t/data/biom_rich_sparse.txt
t/data/blast_tab_usearch.txt
t/data/gaas_compo.txt
t/data/gaas_other.txt
t/data/gaas_seq_compo.txt
t/data/generic_table.txt
t/data/generic_table_mac.txt
t/data/generic_table_win.txt
t/data/gg_99_otu_map.txt
t/data/lorem_ipsum.txt
t/data/qiime_alt_header.txt
t/data/qiime_single_community.txt
t/data/qiime_w_bc_ids.txt
t/data/qiime_w_greengenes_taxo.txt
t/data/qiime_w_missing.txt
t/data/qiime_w_no_taxo.txt
t/data/qiime_w_root.txt
t/data/qiime_w_silva_taxo_and_dups.txt
t/data/qiime_w_silva_taxo_L2.txt
t/data/qiime_w_two_communities.txt
t/data/rep_set_tax_assignments.txt
t/data/table.txt
t/data/table_2.txt
t/data/table_extra_line.txt
t/data/table_mac.txt
t/data/table_win.txt
t/data/taxonomy/greengenes_taxonomy_16S_candiv_gg_2011_1.txt
t/data/taxonomy/ncbi_small_names.dmp
t/data/taxonomy/ncbi_small_nodes.dmp
t/data/taxonomy/silva_SSURef_108_tax_silva_trunc.fasta
t/data/to_merge_1.qiime
t/data/to_merge_2.qiime
t/data/unifrac_qualitative.txt
t/data/unifrac_quantitative.txt
t/data/unifrac_quantitative_tricky.txt
t/data/weights_1.txt
t/data/weights_2.txt
t/data/weights_otuid.txt
t/data/weights_taxstring.txt
t/IO.t
t/IO/Driver/biom.t
t/IO/Driver/gaas.t
t/IO/Driver/generic.t
t/IO/Driver/qiime.t
t/IO/Driver/unifrac.t
t/IO/FormatGuesser.t
t/IO/weights.t
t/Member.t
t/Meta.t
t/Meta/Beta.t
t/Meta/Gamma.t
t/Role/Locked.t
t/Role/PRNG.t
t/Role/Table.t
t/Role/TestLocked.pm
t/Role/TestPRNG.pm
t/Role/TestTable.pm
t/Tools/Accumulator.t
t/Tools/IdConverter.t
t/Tools/Rarefier.t
t/Tools/Sampler.t
t/Tools/ShrapnelCleaner.t
t/Tools/Summarizer.t
t/Tools/Transformer.t
xt/pod-coverage.t