| This Release | PerlMol-0.35_00.ppm | [Download] [Browse] | 24 May 2005 ** UNAUTHORIZED RELEASE ** |
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| License | Unknown | ||
| Chemistry::3DBuilder | Generate 3D coordinates from a connection table | 0.10 | |
| Chemistry::Atom | Chemical atoms as objects in molecules | 0.35 | |
| Chemistry::Bond | Chemical bonds as objects in molecules | 0.35 | |
| Chemistry::Bond::Find | Detect bonds in a molecule from atomic 3D coordinates and assign formal bond orders | 0.21 | |
| Chemistry::Canonicalize | Number the atoms in a molecule in a unique way | 0.10 | |
| Chemistry::Domain | Class for domains in macromolecules | 0.06 | |
| Chemistry::File | Molecule file I/O base class | 0.35 | |
| Chemistry::File::Dumper | Read and write molecules via Data::Dumper | 0.35 | |
| Chemistry::File::Formula | Molecular formula reader/formatter | 0.35 | |
| Chemistry::File::FormulaPattern | Wrapper Chemistry::File class for Formula patterns | 0.10 | |
| Chemistry::File::MDLMol | MDL molfile reader/writer | 0.20 | |
| Chemistry::File::MidasPattern | Wrapper Chemistry::File class for Midas patterns | 0.11 | |
| Chemistry::File::Mopac | MOPAC 6 input file reader/writer | 0.15 | |
| Chemistry::File::PDB | Protein Data Bank file format reader/writer | 0.21 | |
| Chemistry::File::SDF | MDL Structure Data File reader/writer | 0.20 | |
| Chemistry::File::SLN | SLN linear notation parser/writer | 0.11 | |
| Chemistry::File::SLN::Parser | |||
| Chemistry::File::SMARTS | SMARTS chemical substructure pattern linear notation parser | 0.22 | |
| Chemistry::File::SMILES | SMILES linear notation parser/writer | 0.44 | |
| Chemistry::File::VRML | Generate VRML models for molecules | 0.10 | |
| Chemistry::File::XYZ | XYZ molecule format reader/writer | 0.11 | |
| Chemistry::FormulaPattern | Match molecule by formula | 0.10 | |
| Chemistry::InternalCoords | Represent the position of an atom using internal coordinates and convert it to Cartesian coordinates. | 0.18 | |
| Chemistry::InternalCoords::Builder | Build a Z-matrix from cartesian coordinates | 0.18 | |
| Chemistry::Isotope | Table of the isotopes exact mass data | 0.11 | |
| Chemistry::MacroMol | Perl module for macromolecules | 0.06 | |
| Chemistry::MidasPattern | Select atoms in macromolecules | 0.11 | |
| Chemistry::Mok | molecular awk interpreter | 0.25 | |
| Chemistry::Mol | Molecule object toolkit | 0.35 | |
| Chemistry::Obj | Abstract chemistry object | 0.35 | |
| Chemistry::Pattern | Chemical substructure pattern matching | 0.26 | |
| Chemistry::Pattern::Atom | An atom that knows how to match | 0.26 | |
| Chemistry::Pattern::Bond | A bond that knows how to match | 0.26 | |
| Chemistry::Reaction | Explicit chemical reactions | 0.02 | |
| Chemistry::Ring | Represent a ring as a substructure of a molecule | 0.19 | |
| Chemistry::Ring::Find | Find the rings (cycles) in a molecule | 0.19 | |
| Math::VectorReal | Module to handle 3D Vector Mathematics | UNAUTHORIZED | 1.0 |
| Parse::Yapp | Perl extension for generating and using LALR parsers. | UNAUTHORIZED | |
| Parse::Yapp::Driver | UNAUTHORIZED | 1.05 | |
| Parse::Yapp::Grammar | UNAUTHORIZED | ||
| Parse::Yapp::Lalr | UNAUTHORIZED | ||
| Parse::Yapp::Options | UNAUTHORIZED | ||
| Parse::Yapp::Output | UNAUTHORIZED | ||
| Parse::Yapp::Parse | UNAUTHORIZED | ||
| PerlMol | Perl modules for molecular chemistry | 0.3500 | |
| Statistics::Regression | weighted linear regression package (line+plane fitting) | 0.15 |
| Chemistry::Tutorial | PerlMol Quick Tutorial |
| mok | an awk for molecules |
| yapp | A perl frontend to the Parse::Yapp module |
