Joachim Bargsten > Bio-Gonzales-0.0543 > Bio::Gonzales::Seq::Filter::ProteinCleaner

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Module Version: 0.0101   Source   Latest Release: Bio-Gonzales-0.0547_01

NAME ^

Bio::Gonzales::Seq::Filter::ProteinCleaner - clean protein sequences

SYNOPSIS ^

    my $pc = Bio::Gonzales::Seq::Filter::ProteinCleaner->new(no_desc => 1, uncommon_aa => 1, terminal => 1);
    my $seqs = $pc->clean(@seqs)

DESCRIPTION ^

Remove or replace strings from protein sequences that usually confuse 3rd party software

METHODS ^

$seqs = $pc->clean(@seqs)

Clean the sequences @seqs. Works on the objects.

AUTHOR ^

jw bargsten, <joachim.bargsten at wur.nl>

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