show-align2clustalw.pl - convert mummer alignment files to clustalw format
# store results in OUTPUT.aln perl show-align2clustalw.pl [OPTIONS] <MUMMER_ALIGNMENT.aln> <CLUSTALW_OUTPUT.aln> # print results to standard output perl show-align2clustalw.pl [OPTIONS] <MUMMER_ALIGNMENT.aln> # or perl show-align2clustalw.pl [OPTIONS] <MUMMER_ALIGNMENT.aln> -
This script converts MUMMER's show-aligns output to clustalw formatted output.
Alternative option names are separated by "|".
Complete help.
Bio::FeatureIO, Bio::SeqFeature::Generic
jw bargsten, <joachim.bargsten at wur.nl>
<joachim.bargsten at wur.nl>
To install Bio::Gonzales, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::Gonzales
CPAN shell
perl -MCPAN -e shell install Bio::Gonzales
For more information on module installation, please visit the detailed CPAN module installation guide.