Joachim Bargsten > Bio-Gonzales > Bio::Gonzales::AV

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NAME ^

Bio::Gonzales::AV - analysis project utils

SYNOPSIS ^

    use Bio::Gonzales::AV qw(catfile nfi $ANALYSIS_VERSION iof path_to analysis_path msg error debug);

SUBROUTINES ^

msg(@stuff)

say @stuff to STDERR.

path_to($filename)

Locate the root of the project and prepend it to the $filename.

iof()

get access to the IO files config file. Use like

    my $protein_files = iof()->{protein_files}
nfi($filename)

Prepend the current analysis version diretory to the filename.

catfile($path, $file)

make them whole again...

SEE ALSO ^

AUTHOR ^

jw bargsten, <joachim.bargsten at wur.nl>

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