Joachim Bargsten > Bio-Grid-Run-SGE-0.0382

Bio-Grid-Run-SGE-0.0382

This Release Bio-Grid-Run-SGE-0.0382  [Download] [Browse 13 Jan 2014
Latest Release Bio-Grid-Run-SGE-0.0383  [Download] [Browse 28 Feb 2014
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CPAN Testers PASS (5)   FAIL (6)   NA (15)   [ View Reports ] [ Perl/Platform Version Matrix ]
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License The Perl 5 License (Artistic 1 & GPL 1)
Special Files
Build.PL
LICENSE
META.yml
README

Modules

Bio::Grid::Run::SGE Distribute (biological) analyses on the local SGE grid     0.0101
Bio::Grid::Run::SGE::Config     0.0101
Bio::Grid::Run::SGE::Index Provides an interface to load index classes.     0.0101
Bio::Grid::Run::SGE::Index::Dummy dummy index for testing purposes     0.0101
Bio::Grid::Run::SGE::Index::FileList Creates an index from a list of files     0.0101
Bio::Grid::Run::SGE::Index::General     0.0101
Bio::Grid::Run::SGE::Index::List     0.0101
Bio::Grid::Run::SGE::Index::ListFromFile     0.0101
Bio::Grid::Run::SGE::Index::Range     0.0101
Bio::Grid::Run::SGE::Iterator Provides an interface to load iterator classes.     0.0101
Bio::Grid::Run::SGE::Iterator::AllvsAll Iterate through two indices by combining all elements from the first with the second index.     0.0101
Bio::Grid::Run::SGE::Iterator::AllvsAllNoRep     0.0101
Bio::Grid::Run::SGE::Iterator::AvsB     0.0101
Bio::Grid::Run::SGE::Iterator::Consecutive iterate consecutively through an index     0.0101
Bio::Grid::Run::SGE::Iterator::Dummy     0.0101
Bio::Grid::Run::SGE::Iterator::List     0.0101
Bio::Grid::Run::SGE::Iterator::None     0.0101
Bio::Grid::Run::SGE::Log::Analysis     0.0101
Bio::Grid::Run::SGE::Log::Notify::Jabber     0.0101
Bio::Grid::Run::SGE::Log::Notify::Mail     0.0101
Bio::Grid::Run::SGE::Log::Worker     0.0101
Bio::Grid::Run::SGE::Master     0.0101
Bio::Grid::Run::SGE::Role::Indexable Basic role for all indices     0.0101
Bio::Grid::Run::SGE::Role::Iterable iterator role/base class     0.0101
Bio::Grid::Run::SGE::Util Utility functions for Bio::Grid::Run::SGE     0.0101
Bio::Grid::Run::SGE::Util::Blast basic blast utitlity functions for cluster-wide operations     0.0101
Bio::Grid::Run::SGE::Util::ExampleEnvironment     0.0101
Bio::Grid::Run::SGE::Worker Run the cluster script     0.0101
Mtest     0.0101

Documentation

cl_iprscan.pl clusterscript to run interpro scans  
cl_muscle.pl show your muscles on the cluster.  
jclone clone job directory  
lib/Bio/Grid/Run/SGE/Configuration.pod