ssrtool - Find SSRs
ssrtool [options] file1 [file2 ...]
Options:
-r|--min-repeats A postive integer defining the minimum number of repeats -l|--motif-length A postive integer defining the length of the repeat -o|--out-file A file to write the output (default is STDOUT) --help Show brief help and exit --man Show full documentation
Finds the simple sequence repeats (SSRs) in the files containing sequence data in FASTA format.
Bio::SSRTool.
Ken Youens-Clark <kclark@cshl.edu>.
Copyright (c) 2012 Cold Spring Harbor Laboratory
This module is free software; you can redistribute it and/or modify it under the terms of the GPL (either version 1, or at your option, any later version) or the Artistic License 2.0. Refer to LICENSE for the full license text and to DISCLAIMER for additional warranty disclaimers.
To install Bio::SSRTool, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::SSRTool
CPAN shell
perl -MCPAN -e shell install Bio::SSRTool
For more information on module installation, please visit the detailed CPAN module installation guide.