Lincoln D. Stein > Bio-Graphics-2.33 > Bio::Graphics::Util

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Source   Latest Release: Bio-Graphics-2.37

NAME ^

Bio::Graphics::Util - non-object-oriented utilities used in Bio::Graphics modules

($frame,$offset) = frame_and_offset($pos,$strand,$phase)

Calculate the reading frame for a given genomic position, strand and phase. The offset is the offset from $pos to the first nucleotide of the reading frame.

In a scalar context, returns the frame only.

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