Lincoln D. Stein > GBrowse-2.54 > gbrowse_netinstall.pl

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Source   Latest Release: GBrowse-2.55

NAME ^

gbrowse_netinstall.pl

SYNOPSIS ^

  gbrowse_netinstall.pl -b|--build_param_str BUILD_STRING [options]

options:

 -h|--help                Show this message 
 -d|--dev                 Use the developement version of both GBrowse 
                            and bioperl from CVS
 --bioperl_dev            Use the development version of BioPerl from git
 --gbrowse_dev            Use the development version of GBrowse from SVN
 --build_param_str=<args> Use this string to set Makefile.PL parameters
                            such as CONF or PREFIX for GBrowse 
                            installation
 --install_param_str=<args>
                           Use this string to predefine 'make install' 
                            parameters such as CONF or PREFIX for
                            GBrowse installation
 --wincvs                 WinCVS is present--allow cvs install on Windows 
                            NOTE: This will not work; GBrowse is in 
                            svn now, so this script will have to be updated
 --gbrowse_path           Path to GBrowse tarball (will not download 
                            GBrowse); Assumes a resulting
                            'Generic-Genome-Browser' directory 
 --bioperl_path           Path to BioPerl tarball (will not download
                            BioPerl); Assumes a resulting'bioperl-live' 
                            directory
 --skip_start             Don't wait for 'Enter' at program start
 --skip_bioperl           Don't fetch and install BioPerl; assumes a 
                            working bioperl is already installed

DESCRIPTION ^

Net-based installer of GBrowse

Save this to disk as "gbrowse_netinstall.pl" and run:

   [sudo] perl gbrowse_netinstall.pl
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