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.gitignore
app_mimosa.conf
app_mimosa_testing.conf
app_mimosa_testing2.conf
app_mimosa_testing_abs_path_data_dir.conf
app_mimosa_testing_auth.conf
Build
Build.PL
Changes
examples/data/.gitignore
examples/data/acaryochloris_marina_CP000846.seq
examples/data/acidiphilium_cryptum_protein.seq
examples/data/prunus_necrotus_genomic_rna.seq
examples/data/solanum_peruvianum_mRNA.seq
examples/data2/chupacabra_dna.seq
lib/App/Mimosa.pm  [pod]
lib/App/Mimosa/Aligner.pm
lib/App/Mimosa/Controller/Auth.pm
lib/App/Mimosa/Controller/JSON.pm
lib/App/Mimosa/Controller/Root.pm  [pod]
lib/App/Mimosa/Controller/Sequence.pm
lib/App/Mimosa/Database.pm
lib/App/Mimosa/Job.pm
lib/App/Mimosa/Model/BCS.pm  [pod]
lib/App/Mimosa/Schema/BCS.pm  [pod]
lib/App/Mimosa/Schema/BCS/Result/Mimosa/Job.pm  [pod]
lib/App/Mimosa/Schema/BCS/Result/Mimosa/SequenceSet.pm  [pod]
lib/App/Mimosa/Schema/BCS/Result/Mimosa/SequenceSetOrganism.pm  [pod]
lib/App/Mimosa/Util.pm
lib/App/Mimosa/View/Mason.pm  [pod]
lib/App/Mimosa/View/SeqIO.pm
LICENSE
Makefile.PL
MANIFEST This list of files
MANIFEST.bak
MANIFEST.SKIP
MANIFEST.SKIP.bak
META.json
META.yml
README.md
root/css/error.css
root/css/style.css
root/css/tabs.css
root/favicon.ico
root/images/btn_120x50_built.png
root/images/btn_120x50_built_shadow.png
root/images/btn_120x50_powered.png
root/images/btn_120x50_powered_shadow.png
root/images/btn_88x31_built.png
root/images/btn_88x31_built_shadow.png
root/images/btn_88x31_powered.png
root/images/btn_88x31_powered_shadow.png
root/images/catalyst_logo.png
root/images/mimosa_pudica.jpg
root/js/ext-3.3.1/adapter/ext/ext-base.js
root/js/ext-3.3.1/ext-all.js
root/js/ext-3.3.1/license.txt
root/js/ext-3.3.1/resources/css/ext-all.css
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root/js/jquery.backstretch.min.js
root/js/jquery.js
root/js/mimosa-grid.js
root/js/stacktrace.js
root/js/tabs-admin.js
root/js/tabs.js
run_mimosa
script/debug_freshly_deployed_server.sh
script/mimosa_cgi.pl  [pod]
script/mimosa_create.pl  [pod]
script/mimosa_deploy.pl  [pod]
script/mimosa_fastcgi.pl  [pod]
script/mimosa_server.pl  [pod]
script/mimosa_test.pl  [pod]
t/001_app.t
t/002_basic_routes.t
t/003_aligner.t
t/004_job.t
t/005_submit_route.t
t/006_model_BCS.t
t/007_schema.t
t/009_download_raw.t
t/010_post_index.t
t/010_submit_invalid.t
t/011_config_min_seq_length.t
t/012_config_temp_dir.t
t/013_grid_json.t
t/014_submit_multiple_sequence_sets.t
t/015_mimosa_database.t
t/016_validate.t
t/017_config_default_seq.t
t/018_chado.t
t/020_auth.t
t/025_sequence_api.t
t/026_abs_path_data_dir.t
t/030_download_html_report.t
t/099_pod.t
t/100_podcoverage.t
t/data/.gitignore
t/data/archaeopteryx_protein.seq
t/data/blastdb_test.nucleotide.seq
t/data/config.yml
t/data/extra/cyclops.fasta
t/data/extra/cyclops.fasta.nsi
t/data/extra/extraomgbbq.seq
t/data/extra/foo.gff3
t/data/sequence_input.txt
t/data/solanum_foobarium_dna.seq
t/data/trollus_trollus.seq
t/etc/schema.pl
t/integration/blast.t
t/lib/App/Mimosa/Test.pm
t/lib/App/Mimosa/Test/Mech.pm
t/var/.exists
TODO.md
views/autohandler
views/error.mason
views/footer.mason
views/header.mason
views/index.mason
views/jobs.mason
views/login.mason
views/report.mason
views/results.mason
views/sequence.mason
views/tabs.mason
views/wait.mason