Luis M Rodríguez-R > Polloc-1.5.3b

Polloc-1.5.3b

This Release Polloc-1.5.3b  [Download] [Browse 28 Jun 2011
Other Releases
Links Discussion Forum ] [ View/Report Bugs (1) ] [ Dependencies ] [ Other Tools ]
CPAN Testers PASS (197)   FAIL (12)   [ View Reports ] [ Perl/Platform Version Matrix ]
Rating      (0 Reviews) [ Rate this distribution ]
License The Artistic License 2.0 (GPL Compatible)
Special Files
Build.PL
Makefile.PL
MANIFEST
META.yml
README

Modules

Bio::Polloc Perl library for Polymorphic Locy analyses     1.0503
Bio::Polloc::Genome A group of sequences from the same organism     1.0503
Bio::Polloc::GroupCriteria Rules to group loci     1.0503
Bio::Polloc::GroupCriteria::operator An acillary object for Bio::Polloc::GroupCriteria     1.0503
Bio::Polloc::GroupCriteria::operator::bool A boolean operator     1.0503
Bio::Polloc::GroupCriteria::operator::cons A constant     1.0503
Bio::Polloc::GroupCriteria::operator::num A numeric operator     1.0503
Bio::Polloc::GroupCriteria::operator::seq A sequence operator     1.0503
Bio::Polloc::LociGroup A group of loci     1.0503
Bio::Polloc::Locus::amplicon An amplification product     1.0503
Bio::Polloc::Locus::composition A composition feature     1.0503
Bio::Polloc::Locus::crispr A CRISPR locus     1.0503
Bio::Polloc::Locus::extend A feature based on another one     1.0503
Bio::Polloc::Locus::generic An unknown feature     1.0503
Bio::Polloc::Locus::pattern A loci matching a pattern.     1.0503
Bio::Polloc::Locus::repeat A repetitive locus     1.0503
Bio::Polloc::LocusI Interface of Bio::Polloc::Locus::* objects     1.0503
Bio::Polloc::LocusIO I/O interface of Bio::Polloc::Locus::* objects     1.0503
Bio::Polloc::LocusIO::gff3 A LocusIO for Gff3     1.0503
Bio::Polloc::Polloc::Config Handles .cfg files     1.0503
Bio::Polloc::Polloc::Error Errors handler for the Bio::Polloc::* packages     1.0503
Bio::Polloc::Polloc::IO I/O interface for the Bio::Polloc::* packages     1.0503
Bio::Polloc::Polloc::Root Perl library for Polymorphic Loci Analyses     1.0503
Bio::Polloc::Polloc::Version Provides central package-wide version     1.0503
Bio::Polloc::Rule::boolean A rule of type boolean operator     1.0503
Bio::Polloc::Rule::composition A rule of type composition     1.0503
Bio::Polloc::Rule::crispr A rule of type CRISPR     1.0503
Bio::Polloc::Rule::pattern A rule determined by a pattern     1.0503
Bio::Polloc::Rule::profile A rule of type profile     1.0503
Bio::Polloc::Rule::repeat A rule of type repeat     1.0503
Bio::Polloc::Rule::tandemrepeat A rule of type tandemrepeat     1.0503
Bio::Polloc::RuleI Generic rules interface     1.0503
Bio::Polloc::RuleIO I/O interface for the sets of rules (Bio::Polloc::RuleI)     1.0503
Bio::Polloc::RuleSet::cfg Implementation of Bio::Polloc::RuleIO for .cfg files     1.0503
Bio::Polloc::Typing::bandingPattern banding-pattern-based methods for typing assessment     1.0503
Bio::Polloc::Typing::bandingPattern::amplification banding-pattern-based methods for typing assessment using amplification     1.0503
Bio::Polloc::TypingI Generic typing interface     1.0503
Bio::Polloc::TypingIO I/O interface for genotyping methods (Bio::Polloc::TypingI)     1.0503
Bio::Polloc::TypingIO::cfg Implementation of Bio::Polloc::TypingIO for .cfg files     1.0503

Documentation

scripts/polloc_detect.pl  
scripts/polloc_experiment.pl  
scripts/polloc_gel.pl  
scripts/polloc_group.pl  
scripts/polloc_primers.pl  
scripts/polloc_vntrs.pl  

Other Files

README.md